Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa

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dc.contributor.author Mbelle, Nontombi Marylucy
dc.contributor.author Maningi, Nontuthuko Excellent
dc.contributor.author Tshisevhe, Vhudzani
dc.contributor.author Modipane, Lesedi
dc.contributor.author Amoako, Daniel Gyamfi
dc.contributor.author Sekyere, John Osei
dc.date.accessioned 2018-10-18T04:59:59Z
dc.date.available 2018-10-18T04:59:59Z
dc.date.issued 2017-11-30
dc.description.abstract We report the first draft genome sequence of an Enterococcus faecium sequence type 18 (ST18) strain isolated from a tuberculosis patient in Africa. The genome is comprised of 3,202,539 bp, 501 contigs, 37.70% GC content, 3,202 proteinencoding genes, and 61 RNA genes. The resistome and virulome of this important pathogen are presented herein. en_ZA
dc.description.department Medical Microbiology en_ZA
dc.description.librarian am2018 en_ZA
dc.description.sponsorship Grant 94445 of the National Health Laboratory Services of South Africa. en_ZA
dc.description.uri http://genomea.asm.org en_ZA
dc.identifier.citation Mbelle NM, Maningi NE, Tshisevhe V, Modipane L, Amoako DG, Osei Sekyere J. 2017. Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa. Genome Announc 5:e01381-17. https://DOI.org/10.1128/genomeA.01381-17. en_ZA
dc.identifier.issn 2169-8287 (online)
dc.identifier.other 10.1128/genomeA.01381-17
dc.identifier.uri http://hdl.handle.net/2263/66931
dc.language.iso en en_ZA
dc.publisher American Society for Microbiology en_ZA
dc.rights © 2018 [Author et al]. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license. en_ZA
dc.subject Whole genome sequencing (WGS) en_ZA
dc.subject Urinary tract infection (UTI) en_ZA
dc.subject Tuberculosis (TB) en_ZA
dc.subject South Africa (SA) en_ZA
dc.subject RNA gene en_ZA
dc.subject Multidrug-resistant (MDR) en_ZA
dc.subject Microbial genome en_ZA
dc.subject Hydrolysis en_ZA
dc.subject gyrA gene en_ZA
dc.subject Genetic resistance en_ZA
dc.subject Genetic code en_ZA
dc.subject Gene mutation en_ZA
dc.subject Gene identification en_ZA
dc.subject Enterococcus faecium en_ZA
dc.subject Drug screening en_ZA
dc.subject Cell adhesion en_ZA
dc.subject Bacterium isolate en_ZA
dc.subject Bacterial virulence en_ZA
dc.subject Bacterial strain en_ZA
dc.subject Bacterial genome en_ZA
dc.subject Bacterial cell wall en_ZA
dc.subject Antibiotic sensitivity en_ZA
dc.subject Anaerobic growth en_ZA
dc.subject Untranslated RNA en_ZA
dc.subject Transfer RNA en_ZA
dc.subject Tetracycline en_ZA
dc.subject Streptomycin en_ZA
dc.subject Ribosome RNA en_ZA
dc.subject Quinolone derivative en_ZA
dc.subject Protein ParC en_ZA
dc.subject Moxifloxacin en_ZA
dc.subject Gentamicin en_ZA
dc.subject Genomic DNA en_ZA
dc.subject Collagen binding protein en_ZA
dc.subject Clindamycin en_ZA
dc.subject Ciprofloxacin en_ZA
dc.subject Agarose en_ZA
dc.title Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa en_ZA
dc.type Article en_ZA


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