Browsing Research Articles (Forestry and Agricultural Biotechnology Institute (FABI)) by Subject "Deoxyribonucleic acid (DNA)"

Browsing Research Articles (Forestry and Agricultural Biotechnology Institute (FABI)) by Subject "Deoxyribonucleic acid (DNA)"

Sort by: Order: Results:

  • Diversity of gall-forming rusts (Uromycladium, Pucciniales) on Acacia in Australia 
    Doungsa-ard, C.; McTaggart, Alistair R.; Geering, A.D.W.; Shivas, R.G. (Naturalis Biodiversity Center, 2018-05-16)
    Uromycladium tepperianum has been reported on over 100 species of Acacia, as well as on the closely related plant genera, Falcataria, Racosperma and Paraserianthes. Previous studies have indicated that U. tepperianum may ...
  • Finding needles in haystacks : linking scientific names, reference specimens and molecular data for Fungi 
    Schoch, Conrad L.; Robbertse, Barbara; Robert, Vincent A.; Vu, Duong; Cardinali, Gianluigi; Irinyi, Laszlo; Meyer, Wieland; Nilsson, R. Henrik; Hughes, Karen; Miller, Andrew N.; Kirk, Paul M.; Abarenkov, Kessy; Aime, M. Catherine; Ariyawansa, Hiran A.; Bidartondo, Martin; Boekhout, Teun; Buyck, Bart; Cai, Qing; Chen, Jie; Crespo, Ana; Crous, Pedro W.; Damm, Ulrike; De Beer, Z. Wilhelm; Dentinger, Bryn T.M.; Divakar, Pradeep K.; Duenas, Margarita; Feau, Nicolas; Fliegerova, Katerina; Garcıa, Miguel A.; Ge, Zai-Wei; Griffith, Gareth W.; Groenewald, Johannes Zacharias; Groenewald, Marizeth; Grube, Martin; Gryzenhout, Marieka; Gueidan, Cecile; Guo, Liangdong; Hambleton, Sarah; Hamelin, Richard; Hansen, Karen; Hofstetter, Valerie; Hong, Seung-Beom; Houbraken, Jos; Hyde, Kevin D.; Inderbitzin, Patrik; Johnston, Peter R.; Karunarathna, Samantha C.; Koljalg, Urmas; Kovacs, Gabor M.; Kraichak, Ekaphan; Krizsan, Krisztina; Kurtzman, Cletus P.; Larsson, Karl-Henrik; Leavitt, Steven; Letcher, Peter M.; Liimatainen, Kare; Liu, Jian-Kui; Lodge, Jean; Luangsa-ard, Janet Jennifer; Lumbsch, H. Thorsten; Maharachchikumbura, Sajeewa S.N.; Manamgoda, Dimuthu; Martın, Marıa P.; Minnis, Andrew M.; Moncalvo, Jean-Marc; Mule, Giuseppina; Nakasone, Karen K.; Niskanen, Tuula; Olariaga, Ibai; Papp, Tamas; Petkovits, Tamas; Pino-Bodas, Raquel; Powell, Martha J.; Raja, Huzefa A.; Redecker, Dirk; Sarmiento-Ramirez, J.M.; Seifert, Keith A.; Shrestha, Bhushan; Stenroos, Soili; Stielow, Benjamin; Suh, Sung-Oui; Tanaka, Kazuaki; Tedersoo, Leho; Telleria, M. Teresa; Udayanga, Dhanushka; Untereiner, Wendy A.; Uribeondo, Javier Dieguez; Subbarao, Krishna V.; Vagvolgyi, Csaba; Visagie, Cobus M.; Voigt, Kerstin; Walker, Donald M.; Weir, Bevan S.; Weiß, Michael; Wijayawardene, Nalin N.; Wingfield, Michael J.; Xu, J.P.; Yang, Zhu L.; Zhang, Ning; Zhuang, Wen-Ying; Federhen, Scott (Oxford University Press, 2014)
    DNA phylogenetic comparisons have shown that morphology-based species recognition often underestimates fungal diversity. Therefore, the need for accurate DNA sequence data, tied to both correct taxonomic names and clearly ...
  • Genera of phytopathogenic fungi : GOPHY 4 
    Chen, Q.; Bakhshi, M.; Balci, Y.; Broders, K.D.; Cheewangkoon, R.; Chen, S.F.; Fan, X.L.; Gramaje, D.; Halleen, F.; Horta Jung, M.; Jiang, N.; Jung, T.; Majek, T.; Marincowitz, Seonju; Milenkovic, I.; Mostert, L.; Nakashima, C.; Nurul Faziha, I.; Pan, M.; Raza, M.; Scanu, B.; Spies, C.F.J.; Suhaizan, L.; Suzuki, Hiroyuki; Tian, C.M.; Tomsovsky, M.; Urbez-Torres, J.R.; Wang, W.; Wingfield, Brenda D.; Wingfield, Michael J.; Yang, Q.; Yang, X.; Zare, R.; Zhao, P.; Groenewald, J.Z.; Cai, L.; Crous, Pedro W. (Elsevier, 2022-03)
    This paper is the fourth contribution in the Genera of Phytopathogenic Fungi (GOPHY) series. The series provides morphological descriptions and information about the pathology, distribution, hosts and disease symptoms, ...
  • Habitat fragmentation in a Mediterranean-type forest alters resident and propagule mycorrhizal fungal communities 
    Sapsford, Sarah J.; Paap, Trudy; Hopkins, Anna J.M.; Hardy, Giles E.St.J.; Burgess, Treena I. (Elsevier, 2020-01)
    AIMS : Anthropogenic activities disturb forests and their associated mycorrhizal fungi. The combination of climate change and habitat fragmentation are linked to increased incidence of a canker disease in a Mediterranea ...
  • Non-Mendelian segregation influences the infection biology and genetic structure of the African tree pathogen Ceratocystis albifundus 
    Lee, Dong Hyeon; Roux, Jolanda; Wingfield, Brenda D.; Wingfield, Michael J. (Elsevier, 2018-04)
    The African fungal tree pathogen, Ceratocystis albifundus, undergoes uni-directional mating type switching, giving rise to either self-fertile or self-sterile progeny. Self-sterile isolates lack the MAT1-2-1 gene and have ...
  • Novel two-component system-like elements reveal functional domains associated with restriction-modification systems and paraMORC ATPases in bacteria 
    Bellieny-Rabelo, Daniel; Pretorius, Willem J.S.; Moleleki, Lucy Novungayo (Oxford University Press, 2021-03)
    Two-component systems (TCS) are important types of machinery allowing for efficient signal recognition and transmission in bacterial cells. The majority of TCSs utilized by bacteria is composed of a sensor histidine kinase ...
  • The population structure of the Fusarium brachygibbosum species complex in the grassland biome of South Africa 
    Dhlamini, Lerato; Jacobs, Adriaana; Van der Merwe, Nicolaas Albertus (Albie); Summerell, Brett; Venter, Eduard (Springer, 2024-01)
    Fusarium brachygibbosum Padwick is a phytopathogen with a widespread distribution, infecting various host plants. In South Africa, there is a limited number of studies on the genetic diversity of fusaria, particularly in ...
  • A practical approach to genome assembly and annotation of basidiomycota using the example of Armillaria 
    Mensah, Deborah L. Narh; Wingfield, Brenda D.; Coetzee, Martin Petrus Albertus (Future Science Group, 2023-09-08)
    Technological advancements in genome sequencing, assembly and annotation platforms and algorithms that resulted in several genomic studies have created an opportunity to further our understanding of the biology of ...
  • Reconsideration of species boundaries and proposed DNA barcodes for Calonectria 
    Liu, QianLi; Li, JieQiong; Wingfield, Michael J.; Duong, Tuan A.; Wingfield, Brenda D.; Crous, Pedro W.; Chen, S.F. (Fungal Biodiversity Centre (CBS), 2020-09)
    Calonectria represents a genus of phytopathogenic ascomycetous fungi with a worldwide distribution. In recent years, there has been an increase in the number of taxonomic studies on these fungi. Currently, there are 169 ...
  • Selective feeding behaviors illuminate patterns of sap beetle associations with ophiostomatoid fungi 
    Mbenoun, Michael; Wingfield, Michael J.; Misse, Alain C.; Roux, Jolanda (Springer, 2020-07)
    Sap beetles (Coleoptera: Nitidulidae) are commonly associated with ophiostomatoid fungi, especially those belonging to the family Ceratocystidaceae. This coexistence of insects and fungi, usually on tree wounds, offers the ...
  • SeqCode : a nomenclatural code for prokaryotes described from sequence data 
    Hedlund, Brian P.; Chuvochina, Maria; Hugenholtz, Philip; Konstantinidis, Konstantinos T.; Murray, Alison E.; Palmer, Marike; Parks, Donovan H.; Probst, Alexander J.; Reysenbach, Anna-Louise; Rodriguez-R, Luis M.; Rossello-Mora, Ramon; Sutcliffe, Iain C.; Venter, S.N. (Stephanus Nicolaas); Whitman, William B. (Nature Research, 2022-10)
    Most prokaryotes are not available as pure cultures and therefore ineligible for naming under the rules and recommendations of the International Code of Nomenclature of Prokaryotes (ICNP). Here we summarize the development ...