Forestry and Agricultural Biotechnology Institute (FABI)

Forestry and Agricultural Biotechnology Institute (FABI)

 

FABI, the Forestry and Agricultural Biotechnology Institute, at the University of Pretoria, is a post-graduate research institute that was established in 1997, based on a recognition that the future of forestry and agriculture in South Africa will strongly depend on the incorporation of new and emerging technologies into these industries. Major opportunities for these industries have emerged in recent times, from the applications of biotechnology and bioinformatics, amongst many others. FABI scientists undertake goal-directed research, in partnership with major players in the forestry and agricultural sectors in South Africa and in so doing, promote both human capital and industrial development in the country.

Being based at the University of Pretoria provides FABI with the capacity to build future human resources in biotechnology, that are crucial to the future of forestry and agriculture in South Africa. It also enables collaboration and linkage with the majority of statutory bodies undertaking research in the plant and animal sciences. Additional value comes from training grants, participation of students in research programmes, and an enormous human and technological resource associated with this University.

Staff at the University of Pretoria linked to FABI have also had long-term associations with the fruit tree industry as well as with many other programmes linked to agricultural and forestry crops. Since its establishment, FABI has grown rapidly. FABI is made up of about 180 people including, approximately 15 academic staff, 100+ postgraduate (Hons, MSc, PhD) students, postdoctoral fellows, research visitors, and a small core of technical and support staff. Approximately 30 languages are spoken by members of the FABI Team, illustrating a remarkably multinational and multicultural group.

Visit the FABI website at : http://www.fabinet.up.ac.za.

FABI accommodates students from the Departments of Biochemistry, Chemistry , Genetics, Microbiology and Plant Pathology , Plant Production and Soil Science , Plant Science, and Zoology and Entomology.

Collections in this community

Recent Submissions

  • Makhubele, Lucky; Araia, Mulugheta G.; Chirwa, Paxie W. (Springer, 2023-08)
    Traditional agroforestry has been recognised to contribute to biodiversity conservation; however, biodiversity strategies often lack information about drivers of tree species diver sity loss, which is crucial for ...
  • Rakubu, Innocent Lephaswa; Katumanyane, Agil; Hurley, Brett Phillip (Elsevier, 2024-02)
    Please read abstract in the article.
  • Joubert, Monique; Van den Berg, Noelani; Theron, J.; Swart, Velushka (Elsevier, 2024-01)
    Avocado sunblotch viroid (ASBVd) is the type species of the family Avsunviroidae and the causal agent of avocado sunblotch disease. The disease is characterised by the presence of chlorotic lesions on avocado fruit, leaves ...
  • Chepsergon, Jane; Nxumalo, Celiwe Innocentia; Salasini, Brenda S.C.; Kanzi, Aquillah M.; Moleleki, Lucy N. (American Society for Microbiology, 2022-03-11)
    Oomycetes of the genus Phytophthora encompass several of the most successful plant pathogens described to date. The success of infection by Phytophthora species is attributed to the pathogens’ ability to secrete effector ...
  • Laas, Marili; Adamson, Kalev; Barnes, Irene; Janousek, Josef; Adamcikova, Katarina; Akiba, Mitsuteru; Beenken, Ludwig; Braganca, Helena; Bulgakov, Timur S.; Capretti, Paolo; Cech, Thomas; Cleary, Michelle; Enderle, Rasmus; Ghelardini, Luisa; Jankovsky, Libor; Markovskaja, Svetlana; Matsiakh, Iryna; Meyer, Joana B.; Oskay, Funda; Piskur, Barbara; Raitelaityte, Kristina; Sadikovic, Dusan; Drenkhan, Rein (Wiley, 2022-11)
    Lecanosticta acicola is a pine needle pathogen causing brown spot needle blight that results in premature needle shedding with considerable damage described in North America, Europe, and Asia. Microsatellite and mating ...
  • Bose, Tanay; Vivas, Maria; Slippers, Bernard; Roux, Jolanda; Kemler, Martin; Begerow, Dominik; Witfeld, Frederick; Brachmann, Andreas; Dovey, Steven; Wingfield, Michael J. (Elsevier, 2023-03)
    Plantation forests have the potential to meet global economic and ecological objectives. The sustainability of plantations is influenced by a variety of above- and below-ground factors. Among these factors are soil-associated ...
  • Roux, Jolanda; Wingfield, Michael J.; Marincowitz, Seonju; Solis, Myriam; Phungula, Siphephelo; Pham, Nam Q. (Oxford University Press, 2023-06)
    A serious new disease of Eucalyptus was detected in South African plantations of these trees during the summer of 2021/2022. The first symptoms are minute dark spots on young leaves, petioles and shoots, becoming scab-like ...
  • Queffelec, Josephine; Gaudon, Justin M.; Miller, Daniel R.; Mckenney, Jessica L.; Allison, Jeremy D. (Oxford University Press, 2023-10)
    Colonization of hosts by bark beetles is generally mediated by aggregation pheromones. Species competing for the same resource can limit interspecific interactions and maintain reproductive isolation by using different ...
  • Wingfield, Brenda D.; Berger, David Kenneth; Coetzee, Martin Petrus Albertus; Duong, Tuan A.; Martin, Anke; Pham, Nam Q.; Van den Berg, Noelani; Wilken, Pieter Markus; Arun‑Chinnappa, Kiruba Shankari; Barnes, Irene; Buthelezi, Sikelela; Dahanayaka, Buddhika Amarasinghe; Duran, Alvaro; Engelbrecht, Juanita; Feurtey, Alice; Fourie, Arista; Fourie, Gerda; Hartley, Jesse Marion Holland; Kabwe, Eugene N. K.; Maphosa, Mkhululi N.; Mensah, Deborah L. Narh; Nsibo, David L.; Potgieter, Lizel; Poudel, Barsha; Stukenbrock, Eva H.; Thomas, Chanel; Vaghefi, Niloofar; Welgemoed, Tanya; Wingfield, Michael J. (International Mycological Association, 2022-11-21)
    No abstract available.
  • Wilson, A.M. (Andi); Wingfield, Michael J.; Wingfield, Brenda D. (BMC, 2023-05-13)
    BACKGROUND : Huntiella resides in the Ceratocystidaceae, a family of fungi that accommodates important plant pathogens and insect-associated saprotrophs. Species in the genus have either heterothallic or unisexual (a form ...
  • Macharia, Teresia N.; Duong, Tuan A.; Moleleki, Lucy N. (BMC, 2023-06)
    BACKGROUND: Plant-parasitic nematodes (PPNs) that cause most damage include root-knot nematodes (RKNs) which are a major impediment to crop production. Root-knot nematodes, like other parasites, secrete proteins which are ...
  • Katumanyane, Agil; Slippers, Bernard; Wondafrash, Mesfin; Malan, Antoinette P.; Hurley, Brett Phillip (Springer, 2023-04)
    The control of white grub (Coleoptera: Scarabaeidae) pests of sugarcane and forest plantations is difficult due to their cryptic nature and resistance to chemicals. This study evaluated the potential use of entomopathogenic ...
  • McTaggart, Alistair R.; Drenth, Andre; Wingfield, Michael J.; O'Dwyer, Cecilia; Shuey, Louise S.; Pegg, Geoff S. (Springer, 2022-06)
    Quambalaria are fungal pathogens of Corymbia, Eucalyptus and related genera of Myrtaceae. They are smut fungi (Ustilaginomycota) described from structures that resemble conidia and conidiophores. Whether these spore forms ...
  • Burgess, Treena, I.; Oliva, Jonas; Sapsford, Sarah J.; Sakalidis, Monique L.; Balocchi, Felipe; Paap, Trudy (Springer, 2022-06)
    PURPOSE OF REVIEW : Human-caused global change is fundamentally altering natural forest ecosystems. More trees are exhibiting a wide range of symptoms indicative of poor vigour, particularly stressed species at the edge ...
  • Franic, Iva; Prospero, Simone; Adamson, Kalev; Allan, Eric; Attorre, Fabio; Auger-Rozenberg, Marie Anne; Augustin, Sylvie; Avtzis, Dimitrios; Baert, Wim; Barta, Marek; Bauters, Kenneth; Bellahirech, Amani; Boron, Piotr; Braganca, Helena; Brestovansk, Tereza; Brurberg, May Bente; Burgess, Treena I.; Burokiene, Daiva; Cleary, Michelle; Corley, Juan; Coyle, David R .; Csoka, Gyorgy; Cerny, Karel; Davydenko, Kateryna; De Groot, Maarten; Diez, Julio Javier; Lehtijärvi, H. Tugba Dogmus; Drenkhan, Rein; Edwards, Jacqueline; Elsafy, Mohammed; Eotvos, Csaba Bela; Falko, Roman; Fan, Jianting; Feddern, Nina; Furjes-Miko, Agnes; Gossner, Martin M.; Grad, Bartłomiej; Hartmann, Martin; Havrdova, Ludmila; Horakova, Miriam Kadasi; Hrabetova, Marketa; Justesen, Mathias Just; Kacprzyk, Magdalena; Kenis, Marc; Kirichenko, Natalia; Kovac, Marta; Kramarets, Volodymyr; Lackovic, Nikola; Lantschner, Maria Victoria; Lazarevic, Jelena; Leskiv, Marianna; Li, Hongmei; Madsen, Corrie Lynne; Malumphy, Chris; Matosevic, Dinka; Matsiakh, Iryna; May, Tom W.; Meffert, Johan; Migliorini, Duccio; Nikolov, Christo; O ’Hanlon, Richard; Oskay, Funda; Paap, Trudy; Parpan, Taras; Piskur, Barbara; Ravn, Hans P eter; Richard, John; Ronse, Anne; Roques, Alain; Ruffner, Beat; Sivickis, Karolis; Soliani, Carolina; Talgo, Venche; Tomoshevich, Maria; Uimari, Anne; Ulyshen, Michael; Vettraino, Anna Maria; Villari, Caterina; Wang, Yongjun; Witzell, Johanna; Zlatkovic, Milica; Eschen, Rene (Nature Research, 2022-03-01)
    International trade in plants and climate change are two of the main factors causing damaging tree pests (i.e. fungi and insects) to spread into new areas. To mitigate these risks, a large-scale assessment of tree-associated ...
  • Crous, Pedro W.; Boers, J.; Holdom, D.; Osieck, E.R.; Steinrucken, T.V.; Tan, Y.P.; Vitelli, J.S.; Shivas, R.G.; Barrett, M.; Boxshall, A.-G.; Broadbridge, J.; Larsson, E.; Lebel, T.; Pinruan, U.; Sommai, S.; Alvarado, P.; Bonito, G.; Decock, C.A.; De la Pena-Lastra, S.; Delgado, G.; Houbraken, J.; Macia-Vicente, J.G.; Raja, H.A.; Rigueiro-Rodríguez, A.; Rodríguez, A.; Wingfield, Michael J.; Adams, S.J.; Akulov, A.; AL-Hidmi, T.; Antonín, V.; Arauzo, S.; Arenas, F.; Armada, F.; Aylward, Janneke; Bellanger, J.-M.; Berraf-Tebbal, A.; Bidaud, A.; Boccardo, F.; Cabero, J.; Calledda, F.; Corriol, G.; Crane, J.L.; Dearnaley, J.D.W.; Dima, B.; Dovana, F.; Eichmeier, A.; Esteve-Raventos, F.; Fine, M.; Ganzert, L.; García, D.; Torres-Garcia, D.; Gene, J.; Gutierrez, A.; Iglesias, P.; Istel, L.; Jangsantear, P.; Jansen, G.M.; Jeppson, M.; Karun, N.C.; Karich, A.; Khamsuntorn, P.; Kokkonen, K.; Kolarík, M.; Kubatova, A.; Labuda, R.; Lagashetti, A.C.; Lifshitz, N.; Linde, C.; Loizides, M.; Luangsa-ard, J.J.; Lueangjaroenkit, P.; Mahadevakumar, S.; Mahamedi, A.E.; Malloch, D.W.; Marincowitz, Seonju; Mateos, A.; Moreau, P.-A.; Miller, A.N.; Molia, A.; Morte, A.; Navarro-Rodenas, A.; Nebesarova, J.; Nigrone, E.; Nuthan, B.R.; Oberlies, N.H.; Pepori, A.L.; Rama, T.; Rapley, D.; Reschke, K.; Robicheau, B.M.; Roets, F.; Roux, J.; Saavedra, M.; Sakolrak, B.; Santini, A.; Sevcíkova, H.; Singh, P.N.; Singh, S.K.; Somrithipol, S.; Spetik, M.; Sridhar, K.R.; Starink-Willemse, M.; Taylor, V.A.; Van Iperen, A.L.; Vauras, V.; Walker, A.K.; Wingfield, Brenda D.; Yarden, O.; Cooke, A.W.; Manners, A.G.; Pegg, K.G.; Groenewald, J.Z. (Naturalis Biodiversity Center and Centraalbureau voor Schimmelcultures, 2022-07-02)
    Novel species of fungi described in this study include those from various countries as follows: Australia, Agaricus albofoetidus, Agaricus aureoelephanti and Agaricus parviumbrus on soil, Fusarium ramsdenii from stem cankers ...
  • Mangani, Robert; Gunn, Kpoti M.; Creux, Nicole Marie (Elsevier, 2023-10)
    The anticipated climate change in South Africa is of great concern as Southern Africa appears to be warming at twice that of the global average, limiting maize production in the country and threatening food security in the ...
  • Sklenar, F.; Glassnerova, K.; Jurjevic, Z.; Houbraken, J.; Samson, R.A.; Visagie, C.M. (Cobus); Yilmaz, N.; Gene, J.; Cano, J.; Chen, A.J.; Novakova, A.; Yaguchi, T.; Kolarik, M.; Hubka, V. (Elsevier, 2022-06)
    Aspergillus series Versicolores members occur in a wide range of environments and substrates such as indoor environments, food, clinical materials, soil, caves, marine or hypersaline ecosystems. The taxonomy of the series ...
  • Bian, C.; Kusuya, Y.; Sklenar, F.; D'hooge, E.; Yaguchi, T.; Ban, S.; Visagie, Cobus M.; Houbraken, J.; Takahashi, H.; Hubka, V. (Elsevier, 2022-06)
    The Aspergillus series Nigri contains biotechnologically and medically important species. They can produce hazardous mycotoxins, which is relevant due to the frequent occurrence of these species on foodstuffs and in the ...
  • Glassnerova, K.; Sklenar, F.; Jurjevic, Z.; Houbraken, J.; Yaguchi, T.; Visagie, Cobus M.; Gene, J.; Siqueira, J.P.Z.; Kubatova, A.; Kolarik, M.; Hubka, V. (Elsevier, 2022-06)
    Aspergillus section Candidi encompasses white- or yellow-sporulating species mostly isolated from indoor and cave environments, food, feed, clinical material, soil and dung. Their identification is non-trivial due to ...

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