Research Articles (Forestry and Agricultural Biotechnology Institute (FABI))

Research Articles (Forestry and Agricultural Biotechnology Institute (FABI))

 

Recent Submissions

  • Ally, Nooreen M.; Neetoo, Hudaa; Ranghoo-Sanmukhiya, Vijayanti M.; Coutinho, Teresa A. (EScience Press, 2023-04)
    The cultivation of tomatoes in greenhouse structures is becoming increasingly common as a crop production system. However, the environmental conditions inside a greenhouse favour the development of microbial diseases. These ...
  • Crous, Pedro W.; Akulov, A.; Balashov, S.; Boers, J.; Braun, U.; Castillo, J.; Delgado, M.A.; Denman, S.; Erhard, A.; Gusella, G.; Jurjevic, Z.; Kruze, J.; Malloch, D.W.; Osieck, E.R.; Polizzi, G.; Schumacher, R.K.; Slootweg, E.; Starink-Willemse, M.; Van Iperen, A.L.; Verkley, G.J.M.; Groenewald, Johannes Zacharias (Westerdijk Fungal Biodiversity Institute, 2023-06-16)
    Three new genera, six new species, three combinations, six epitypes, and 25 interesting new host and / or geographical records are introduced in this study. New genera: Neoleptodontidium (based on Neoleptodontidium aquaticum), ...
  • Crous, Pedro W.; Jurjević, Z.; Balashov, S.; De la Peña-Lastra, S.; Mateos, A.; Pinruan, U.; Rigueiro-Rodríguez, A.; Osieck, E.R.; Altés, A.; Czachura, P.; Esteve- Raventós, F.; Gunaseelan, S.; Kaliyaperumal, M.; Larsson, E.; Luangsa-ard, J.J.; Moreno, G.; Pancorbo, F.; Piątek, M.; Sommai, S.; Somrithipol, S.; Asif, M.; Delgado, G.; Flakus, A.; Illescas, T.; Kezo, K.; Khamsuntorn, P.; Kubátová, A.; Labuda, R.; Lavoise, C.; Lebel, , T.; Lueangjaroenkit, P.; Maciá-Vicente, J.G.; Paz, A.; Saba, M.; Shivas, R.G.; Tan, Y.P.; Wingfield, Michael J.; Aas, T.; Abramczyk, B.; Ainsworth, A.M.; Akulov, A.; Alvarado, P.; Armada, F.; Assyov, B.; Avchar, R.; Avesani, M.; Bezerra, J.L.; Bhat, J.D.; Bilański, P.; Bily, D.S.; Boccardo, F.; Bozok, F.; Campos, J.C.; Chaimongkol, S.; Chellappan, N.; Costa, M.M.; Dalecká, M.; Darmostuk, V.; Daskalopoulos, V.; Dearnaley, J.; Dentinger, B.T.M.; De Silva, N.I.; Dhotre, D.; Carlavilla, J.R.; Doungsa-ard, C.; Dovana, F.; Erhard, A.; Ferro, L.O.; Gallegos, S.C.; Giles, C.E.; Gore, G.; Gorfer, M.; Guard, F.E.; Hanson, S.-A.; Haridev, P.; Jankowiak, R.; Jeffers, S.N.; Kandemir, H.; Karich, A.; Kisło, K.; Kiss, L.; Krisai-Greilhuber, I.; Latha, K.P.D.; Lorenzini, M.; Lumyong, S.; Manimohan, P.; Manjón, J.L.; Maula, F.; Mazur, E.; Mesquita, N.L.S.; Młynek, K.; Mongkolsamrit, S.; Morán, P.; Murugadoss, R.; Nagarajan, M.; Nalumpang, S.; Noisripoom, W.; Nosalj, S.; Novaes, Q.S.; Nowak, M.; Pawłowska, J.; Peiger, M.; Pereira, O.L.; Pinto, A.; Plaza, M.; Polemis, E.; Polhorský, A.; Ramos, D.O.; Raza, M.; Rivas- Ferreiro, M.; Rodriguez-Flakus, P.; Ruszkiewicz-Michalska, M.; Sánchez, A.; Santos, A.; Schüller, A.; Scott, P.A.; Şen, İ.; Shelke, D.; Śliwa, L.; Solheim, H.; Sonawane, H.; Strašiftáková, D.; Stryjak-Bogacka, M.; Sudsanguan, M.; Suwannarach, N.; Suz, L.M.; Syme, K.; Taşkın, H.; Tennakoon, D.S.; Tomka, P.; Vaghefi, N.; Vasan, V.; Vauras, J.; Wiktorowicz, D.; Villarreal, M.; Vizzini, A.; Wrzosek, M.; Yang, X.; Yingkunchao, W.; Zapparoli, G.; Zervakis, G.I.; Groenewald, Johannes Zacharias (Westerdijk Fungal Biodiversity Institute, 2024-06)
    Novel species of fungi described in this study include those from various countries as follows: Australia, Baobabopsis sabindy in leaves of Eragrostis spartinoides, Cortinarius magentiguttatus among deep leaf litter, L ...
  • Barreto, G.G.; Souza-Motta, C.M.; Silva, G.A.; Groenewald, Johannes Zacharias; Crous, Pedro W.; Bezerra, J.D.P. (Westerdijk Fungal Biodiversity Institute, 2024-12)
    Meristematic fungi are mainly defined as having aggregates of thick-walled, melanised cells enlarging and reproducing by isodiametric division. Dothideomycetes black meristematic and meristematic-like fungi have been ...
  • Bakhshi, M.; Crous, Pedro W. (Westerdijk Fungal Biodiversity Institute, 2024-12)
    The current paper represents the seventh contribution in the Genera of Fungi series, linking type species of fungal genera to their morphology and DNA sequence data. This manuscript focuses on a genus of dematiaceous ...
  • Crous, Pedro W.; Dijksterhuis, J.; Figge, M.; Sandoval-Denis, M. (Westerdijk Fungal Biodiversity Institute, 2024-06)
    Fusarium agapanthi is newly reported from the centre of origin of Agapanthus in South Africa, where it is associated with dead flower stalks of Agapanthus praecox. Mjuua agapanthi, a rare hyphomycete with a morphology ...
  • Paap, Trudy; Balocchi, Felipe; Burgess, Treena I.; Bose, Tanay; Wingfield, Michael J. (Westerdijk Fungal Biodiversity Institute, 2024-06)
    The genus Phytophthora contains many destructive and globally important plant pathogens. In the last decade, targeted sampling efforts have resulted in a dramatic increase in the number of known species, as well as a ...
  • Franic, Iva; Allan, Eric; Prospero, Simone; Adamson, Kalev; Attorre, Fabio; Auger‑Rozenberg, Marie‑Anne; Augustin, Sylvie; Avtzis, Dimitrios; Baert, Wim; Barta, Marek; Bauters, Kenneth; Bellahirech, Amani; Boron, Piotr; Braganca, Helena; Brestovanská, Tereza; Brurberg, May Bente; Burgess, Treena; Burokiene, Daiva; Cleary, Michelle; Corley, Juan C.; Coyle, David R .; Csoka, Gyorgy; Cerny, Karel; Davydenko, Kateryna; De Groot, Maarten; Diez, Julio J.; Lehtijärvi, H. Tugba Dogmus; Drenkhan, Rein; Edwards, Jacqueline; Elsafy, Mohammed; Eotvos, Csaba Bela; Falko, Roman; Fan, Jianting; Feddern, Nina; Fürjes‑Mikó, Ágnes; Gossner, Martin M.; Grad, Bartłomiej; Hartmann, Martin; Havrdova, Ludmila; Horakova, Miriam Kadasi; Hrabetova, Marketa; Justesen, Mathias Just; Kacprzyk, Magdalena; Kenis, Marc; Kirichenko, Natalia; Kovac, Marta; Kramarets, Volodymyr; Lackovic, Nikola; Lantschner, M. Victoria; Lazarevic, Jelena; Leskiv, Marianna; Li, Hongmei; Madsen, Corrie Lynne; Malumphy, Chris; Matošević, Dinka; Matsiakh, Iryna; May, Tom W.; Mefert, Johan; Migliorini, Duccio; Nikolov, Christo; O’Hanlon, Richard; Oskay, Funda; Paap, Trudy; Parpan, Taras; Piskur, Barbara; Ravn, Hans P eter; Richard, John; Ronse, Anne; Roques, Alain; Rufner, Beat; Santini, Alberto; Sivickis, Karolis; Soliani, Carolina; Talgø, Venche; Tomoshevich, Maria; Uimari, Anne; Ulyshen, Michael; Vettraino, Anna Maria; Villari, Caterina; Wang, Yongjun; Witzell, Johanna; Zlatković, Milica; Eschen, René (Nature Research, 2023-07)
    Non-native pests, climate change, and their interactions are likely to alter relationships between trees and tree-associated organisms with consequences for forest health. To understand and predict such changes, factors ...
  • Groenewald, Johannes Zacharias; Chen, Y.Y.; Zhang, Y.; Roux, Jolanda; Shin, H.-D.; Shivas, R.G.; Summerell, B.A.; Braun, U.; Alfenas, A.C.; Ujat, A.H.; Nakashima, C.; Crous, Pedro W. (Westerdijk Fungal Biodiversity Institute, 2024-06)
    Species of Pseudocercospora are commonly associated with leaf and fruit spots on diverse plant hosts in sub-tropical and tropical regions. Pseudocercospora spp. have mycosphaerella-like sexual morphs, but represent ...
  • Visagie, Cobus M.; Yilmaz, Neriman; Allison, Jeremy D.; Barreto, R.W.; Boekhout, Teun; Boers, J.; Delgado, M.A.; Dewing, Claudette; Fitza, Katrin N.E.; Furtado, E.C.A.; Gaya, E.; Hill, R.; Hobden, A.; Hu, D.M.; Hülsewig, T.; Khonsanit, A.; Luangsa-ard, J.J.; Mthembu, Alice; Pereira, C.M.; Price, Jenna-Lee; Pringle, A.; Qikani, Nombulelo; Sandoval-Denis, M.; Schumacher, R.K.; Seifert, K.A.; Slippers, Bernard; Tennakoon, D.S.; Thanakitpipattana, D.; Van Vuuren, Nicole Innike; Groenewald, Johannes Zacharias; Crous, Pedro W. (Westerdijk Fungal Biodiversity Institute, 2024-06)
    Two new genera, 17 new species, two epitypes, and six interesting new host and / or geographical records are introduced in this study. New genera include: Cadophorella (based on Cadophorella faginea) and Neosatchmopsis ...
  • Slippers, Bernard; Ramabulana, Elelwani; Coetzee, Martin Petrus Albertus (Westerdijk Fungal Biodiversity Institute, 2024-06)
    Members of the Botryosphaeriaceae are well-known endophytes and stress-related pathogens. We recently characterised the diversity of Botryosphaeriaceae in healthy tissues of three tree species in the Anacardiaceae, namely ...
  • Visagie, Cobus M.; Cruywagen, Elsie M.; Duong, Tuan A. (Westerdijk Fungal Biodiversity Institute, 2023-06)
    During a survey of fungi on electricity utility poles in South Africa, a diverse range of fungi were discovered. Paecilomyces was frequently isolated, with five species identified using ITS and β-tubulin (BenA) sequences. ...
  • Suzuki, Hiroyuki; Marincowitz, Seonju; Roux, Jolanda; Paap, Trudy; Wingfield, Brenda D.; Wingfield, Michael J. (Wiley, 2024-06)
    Fungi in the Cryphonectriaceae are important canker pathogens of woody shrubs and trees in the Melastomataceae and Myrtaceae (Myrtales). During 2021 disease surveys in KwaZulu-Natal (South Africa) plantations, a serious ...
  • Abkallo, Hussein M.; Arbuthnot, Patrick; Auer, Thomas O.; Berger, David Kenneth; Burger, Johan; Chakauya, Ereck; Concordet, Jean-Paul; Diabate, Abdoulaye; Di Donato, Vincenzo; Groenewald, Jan-Hendrik; Guindo, Amadou; Koekemoer, Lizette L.; Nazare, Florence; Nolan, Tony; Okumu, Fredros; Orefuwa, Emma; Paemka, Lily; Prieto-Godino, Lucia; Runo, Steven; Sadler, Marie; Tesfaye, Kassahun; Tripathi, Leena; Wondji, Charles (Nature Research, 2024-04)
    No abstract available.
  • Pietersen, Gerhard; Morgan, Seamus W.; Read, David Alan (Springer, 2024)
    No abstract available.
  • Lötter, Anneri; Duong, Tuan A.; Candotti, Julia; Mizrachi, Eshchar; Wegrzyn, Jill; Myburg, Alexander A. (Oxford University Press, 2023-08)
    BACKGROUND De novo phased (haplo)genome assembly using long-read DNA sequencing data has improved the detection and characterization of structural variants (SVs) in plant and animal genomes. Able to span across haplotypes, ...
  • Van der Merwe, Nicolaas Albertus (Albie); Phakalatsane, Tshiamo; Wilken, Pieter Markus (MDPI, 2023-05-26)
    Chrysoporthe syzygiicola and C. zambiensis are ascomycete tree pathogens first described from Zambia, causing stem canker on Syzygium guineense and Eucalyptus grandis, respectively. The taxonomic descriptions of these ...
  • Maseko, Nomaswazi Nosipho; Steenkamp, Emma Theodora; Wingfield, Brenda D.; Wilken, Pieter Markus (MDPI, 2023-03-31)
    Transcriptional regulation controls gene expression through regulatory promoter regions that contain conserved sequence motifs. These motifs, also known as regulatory elements, are critically important to expression, ...
  • Mensah, Deborah L. Narh; Wingfield, Brenda D.; Coetzee, Martin Petrus Albertus (Oxford University Press, 2023)
    Siderophores are important for ferric iron solubilization, sequestration, transportation, and storage, especially under iron-limiting conditions such as aerobic conditions at high pH. Siderophores are mainly produced by ...
  • Welgemoed, Tanya; Duong, Tuan A.; Barnes, Irene; Stukenbrock, Eva H.; Berger, David Kenneth (Oxford University Press, 2023)
    A serious factor hampering global maize production is gray leaf spot disease. Cercospora zeina is one of the causative pathogens, but population genomics analysis of C. zeina is lacking. We conducted whole-genome Illumina ...

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