dc.contributor.author |
Kruger, Meike S.
|
|
dc.contributor.author |
Kanzaki, Natsumi
|
|
dc.contributor.author |
Giblin-Davis, Robin M.
|
|
dc.contributor.author |
Greeff, Jaco M. (Jacobus Maree)
|
|
dc.date.accessioned |
2022-05-17T05:20:28Z |
|
dc.date.available |
2022-05-17T05:20:28Z |
|
dc.date.issued |
2021-08 |
|
dc.description.abstract |
Nematodes of figs and fig wasps have received limited attention in Africa since their discovery in 1973. Sixteen of the 25 species of native South African figs were sampled for nematode associates using molecular barcoding with three loci (SSU, LSU D2-D3 and mtCOI)
and fourteen (93%) were positive for at least one nematode species. Thirty-three putative
species of nematodes were identified and classified according to the loci that were amplified
and successfully sequenced. Fourteen putative nematode species were classified as Aphelenchoididae, of which nine were identified as Ficophagus from four species of Ficus from
the section Galoglychia (i.e., five ex F. burkei including one shared with F. natalensis, one
ex F. glumosa, one ex F. lutea, and one ex F. stuhlmannii) and one species ex F. sur from
the section Sycomorus. In addition, there were four nematode species classified as Schistonchus s.s. from section Galoglychia figs (i.e., one ex F. burkei, two ex F. trichopoda, and
one ex F. glumosa). There was also one species of Bursaphelenchus nematode recovered
from F. sur from the section Sycomorus. Sixteen putative nematode species were classified
as Diplogastridae, of which eight occurred in two clades of what is currently called Parasitodiplogaster with one (P. salicifoliae) being recovered from two Ficus species in the section
Urostigma (F. salicifolia and F. ingens) and seven diplogastrids being associated with six
species of Ficus from the section Galoglychia (i.e., two ex F. burkei including P. sycophilon,
one ex F. stuhlmannii, one ex F. burtt-davyi, one ex F. trichopoda, one ex F. abutilifolia and
one ex F. sansibarica). Three Acrostichus spp., a Teratodiplogaster and a Pristionchus species were recovered from F. sur and two Teratodiplogaster spp. and Pristionchus sycomori
were recovered from F. sycomorus with both Ficus species belonging to the subgenus and
section Sycomorus. The identities of the previously described T. martini and Parasitodiplogaster doliostoma (= Pristionchus sp. 35) are discussed. Lastly, there was a panagrolaimid
identified from F. petersii. |
en_US |
dc.description.department |
Biochemistry |
en_US |
dc.description.department |
Genetics |
en_US |
dc.description.department |
Microbiology and Plant Pathology |
en_US |
dc.description.librarian |
pm2022 |
en_US |
dc.description.sponsorship |
The National Research Foundation of South Africa and the Japan Society for the Promotion of Science. |
en_US |
dc.description.uri |
http://www.plosone.org |
en_US |
dc.identifier.citation |
Kruger MS, Kanzaki N, Giblin-Davis RM,
Greeff JM (2021) Molecular diversity and
relationships of fig associated nematodes from
South Africa. PLoS ONE 16(8): e0255451. https://doi.org/10.1371/journal.pone.0255451. |
en_US |
dc.identifier.issn |
1932-6203 (online) |
|
dc.identifier.other |
10.1371/journal.pone.0255451 |
|
dc.identifier.uri |
https://repository.up.ac.za/handle/2263/85227 |
|
dc.language.iso |
en |
en_US |
dc.publisher |
Public Library of Science |
en_US |
dc.rights |
© 2021 Kruger et al. This is an open
access article distributed under the terms of the
Creative Commons Attribution License. |
en_US |
dc.subject |
Nematodes |
en_US |
dc.subject |
Figs |
en_US |
dc.subject |
Fig wasps |
en_US |
dc.subject |
South Africa (SA) |
en_US |
dc.title |
Molecular diversity and relationships of fig associated nematodes from South Africa |
en_US |
dc.type |
Article |
en_US |