Browsing Research Articles (Genetics) by Title

Browsing Research Articles (Genetics) by Title

Sort by: Order: Results:

  • Identification and characterization of a novel Geobacillus thermoglucosidasius bacteriophage, GVE3 
    Van Zyl, Leonardo J.; Sunda, Falone; Taylor, M.P.; Cowan, Don A.; Trindade, Marla Iris (Springer, 2015-09)
    The study of extremophilicphages may reveal new phage families as well as different mechanisms of infection, propagation and lysis to those found in phages from temperate environments. We describe a novel siphovirus, GVE3, ...
  • The identification and differential expression of Eucalyptus grandis pathogenesis-related genes in response to salicylic acid and methyl jasmonate 
    Naidoo, Ronishree; Ferreira, Linda; Berger, David Kenneth; Myburg, Alexander Andrew; Naidoo, Sanushka (Frontiers Research Foundation, 2013-03-06)
    Two important role players in plant defence response are the phytohormones salicylic acid (SA) and jasmonic acid (JA); both of which have been well described in model species such as Arabidopsis thaliana. Several pathogenesis ...
  • Identification and functional evaluation of accessible chromatin associated with wood formation in Eucalyptus grandis 
    Brown, Katrien; Takawira, Lazarus Tichararama; O'Neill, Marja Mirjam; Mizrachi, Eshchar; Myburg, Alexander Andrew; Hussey, Steven Grant (Wiley, 2019-09)
    Accessible chromatin changes dynamically during development and harbours functional regulatory regions which are poorly understood in the context of wood development. We explored the importance of accessible chromatin in ...
  • Identification of a BRCA2-specific modifier locus at 6p24 related to breast cancer risk 
    Gaudet, Mia M.; Kuchenbaecker, Karoline B.; Vijai, Joseph; Klein, Robert J.; Kirchhoff, Tomas; McGuffog, Lesley; Barrowdale, Daniel; Dunning, Alison M.; Lee, Andrew; Dennis, Joe; Healey, Sue; Dicks, Ed; Soucy, Penny; Sinilnikova, Olga M.; Pankratz, Vernon S.; Wang, Xianshu; Eldridge, Ronald C; Tessier, Daniel C.; Vincent, Daniel; Bacot, Francois; Hogervorst, Frans B.L.; Peock, Susan; Stoppa-Lyonnet, Dominique; Cuningham, Kathleen; Peterlongo, Paolo; Schmutzler, Rita K.; Nathanson, Katherine L.; Piedmonte, Marion; Singer, Christian F.; Thomassen, Mads; Lunenfeld, Samuel; Hansen, Thomas V.O.; Neuhausen, Susan L.; Blanco, Ignacio; Greene, Mark H.; Garber, Judy; Weitzel, Jeffrey N.; Andrulis, Irene L.; Goldgar, David E.; D’Andrea, Emma; Caldes, Trinidad; Nevanlinna, Heli; Osorio, Ana; Jansen van Rensburg, Elizabeth; Arason, Adalgeir; Rennert, Gad; Van den Ouweland, Ans M.W.; Van der Hout, Annemarie H.; Kets, Carolien M.; Aalfs, Cora M.; Wijnen, Juul T.; Ausems, Margreet G.E.M.; Frost, Debra; Ellis, Steve; Fineberg, Elena; Platte, Radka; Evans, D. Gareth; Jacobs, Chris; Adlard, Julian; Tischkowitz, Marc; Porteous, Mary E.; Damiola, Francesca; Golmard, Lisa; Barjhoux, Laure; Longy, Michel; Belotti, Muriel; Ferrer, Sandra Fert; Mazoyer, Sylvie; Spurdle, Amanda B.; Manoukian, Siranoush; Barile, Monica; Genuardi, Maurizio; Arnold, Norbert; Meindl, Alfons; Sutter, Christian; Wappenschmidt, Barbara; Domchek, Susan M.; Pfeiler, Georg; Friedman, Eitan; Jensen, Uffe Birk; Robson, Mark; Shah, Sohela; Lazaro, Conxi; Mai, Phuong L.; Benitez, Javier; Southey, Melissa C.; Schmidt, Marjanka K.; Fasching, Peter A.; Peto, Julian; Humphreys, Manjeet K.; Wang, Qin; Michailidou, Kyriaki; Sawyer, Elinor J.; Burwinkel, Barbara; Guenel, Pascal; Bojesen, Stig E.; Milne, Roger L.; Brenner, Hermann; Lochmann, Magdalena; Fischer-Bosch, Margarete; Aittomaki, Kristiina; Dork, Thilo; Margolin, Sara; Mannermaa, Arto; Lambrechts, Diether; Chang-Claude, Jenny; Radice, Paolo; Giles, Graham G.; Haiman, Christopher A.; Winqvist, Robert; Devilee, Peter; Garcıa-Closas, Montserrat; Schoof, Nils; Hooning, Maartje J.; Cox, Angela; Pharoah, Paul D.P.; Jakubowska, Anna; Orr, Nick; Gonzalez-Neira, Anna; Pita, Guillermo; Alonso, M. Rosario; Hall, Per; Couch, Fergus J.; Simard, Jacques; Altshuler, David; Easton, Douglas F.; Chenevix-Trench, Georgia; Antoniou, Antonis C.; Offit, Kenneth; Hunter, Kent W. (Public Library of Science, 2013-03-27)
    Common genetic variants contribute to the observed variation in breast cancer risk for BRCA2 mutation carriers; those known to date have all been found through population-based genome-wide association studies (GWAS). ...
  • Identification of a major QTL for time of initial vegetative budbreak in apple (Malus x domestica Borkh.) 
    Van Dyk, Maria M.; Soeker, Mogamat Khashief; Labuschagne, Iwan F.; Rees, David Jasper G. (Springer, 2010-04)
    In the Western Cape region of South Africa dormancy release and the onset of growth does not occur normally in apple (Malus x domestica Borkh.) trees during spring due to the mild winter conditions experienced and ...
  • Identification of Armillaria species on declined oak in Britain : implications for oak health 
    Denman, Sandra; Barrett, Glyn; Kirk, Susan A.; McDonald, James E.; Coetzee, Martin Petrus Albertus (Oxford University Press, 2017-01)
    The identity of 51 isolates of Armillaria from 15 Quercus robur trees in poor health, and a single healthy tree, at nine sites in England, was determined using multilocus sequence analysis (MLSA) of three gene regions. ...
  • Identification of four novel susceptibility loci for oestrogen receptor negative breast cancer 
    Couch, Fergus J.; Kuchenbaecker, Karoline B.; Michailidou, Kyriaki; Mendoza-Fandino, Gustavo A.; Nord, Silje; Lilyquist, Janna; Olswold, Curtis; Hallberg, Emily; Agata, Simona; Ahsan, Habibul; Aittomaki, Kristiina; Ambrosone, Christine; Andrulis, Irene L.; Anton-Culver, Hoda; Arndt, Volker; Arun, Banu K.; Arver, Brita; Barile, Monica; Barkardottir, Rosa B.; Barrowdale, Daniel; Beckmann, Lars; Beckmann, Matthias W.; Benitez, Javier; Blank, Stephanie V.; Blomqvist, Carl; Bogdanova, Natalia V.; Bojesen, Stig E.; Bolla, Manjeet K.; Bonanni, Bernardo; Brauch, Hiltrud; Brenner, Hermann; Burwinkel, Barbara; Buys, Saundra S.; Caldes, Trinidad; Caligo, Maria A.; Canzian, Federico; Carpenter, Jane; Chang-Claude, Jenny; Chanock, Stephen J.; Chunk, Wendy K.; Claes, Kathleen B. M.; Cox, Angela; Cross, Simon S.; Cunningham, Julie M.; Czene, Kamila; Daly, Mary B.; Damiola, Francesca; Darabi, Hatef; De la Hoya, Miguel; Devilee, Peter; Diez, Orland; Ding, Yuan C.; Dolcetti, Riccardo; Domchek, Susan M.; Dorfling, Cecilia Maria; Dos-Santos-Silva, Isabel; Dumont, Martine; Dunning, Alison M.; Eccles, Diana M.; Ehrencrona, Hans; Ekici, Arif B.; Eliassen, Heather; Ellis, Steve; Fasching, Peter A.; Figueroa, Jonine; Flesch-Janys, Dieter; Forsti, Asta; Fostira, Florentia; Foulkes, William D.; Friebel, Tara; Friedman, Eitan; Frost, Debra; Gabrielson, Marike; Gammon, Marilie D.; Ganz, Patricia A.; Gapstur, Susan M.; Garber, Judy; Gaudet, Mia M.; Gayther, Simon A.; Gerdes, Anne-Marie; Ghoussaini, Maya; Giles, Graham G.; Glendon, Gord; Godwin, Andrew K.; Goldberg, Mark S.; Goldgar, David E.; Gonzalez-Neira, Anna; Greene, Mark H.; Gronwald, Jacek; Guenel, Pascal; Gunter, Marc; Haeberle, Lothar; Haiman, Christopher A.; Hamann, Ute; Hansen, Thomas V.O.; Hart, Steven; Healey, Sue; Heikkinen, Tuomas; Henderson, Brian E.; Herzog, Josef; Hogervorst, Frans B.L.; Hollestelle, Antoinette; Hooning, Maartje J.; Hoover, Robert N.; Hopper, John L.; Hunter, David J.; Huzarski, Tomasz; Imyanitov, Evgeny N.; Isaacs, Claudine; Jakubowska, Anna; James, Paul; Janavicius, Ramunas; Jensen, Uffe Birk; John, Esther M.; Jones, Michael; Kabisch, Maria; Kar, Siddhartha; Karlan, Beth Y.; Khan, Sofia; Khaw, Kay-Tee; Kibriya, Muhammad G.; Knight, Julia A.; Ko, Yon-Dschun; Konstantopoulou, Irene; Kosma, Veli-Matti; Kristensen, Vessela; Kwong, Ava; Laitman, Yael; Lambrechts, Diether; Lazaro, Conxi; Lee, Eunjung; Le Marchand, Loic; Lester, Jenny; Lindblom, Annika; Lindor, Noralane; Lindstrom, Sara; Liu, Jianjun; Long, Jirong; Lubinski, Jan; Mai, Phuong L.; Makalic, Enes; Malone, Kathleen E.; Mannermaa, Arto; Manoukian, Siranoush; Margolin, Sara; Marme, Frederik; Martens, John W. M.; McGuffog, Lesley; Meindl, Alfons; Miller, Austin; Milne, Roger L.; Miron, Penelope; Montagna, Marco; Mazoyer, Sylvie; Mulligan, Anna M.; Muranen, Taru A.; Nathanson, Katherine L.; Neuhausen, Susan L.; Nevanlinna, Heli; Nordestgaard, Borge G.; Nussbaum, Robert L.; Offit, Kenneth; Olah, Edith; Olopade, Olufunmilayo I.; Olson, Janet E.; Osorio, Ana; Park, Sue K.; Peeters, Petra H.; Peissel, Bernard; Peterlongo, Paolo; Julian, Peto; Phelan, Catherine M.; Pilarski, Robert; Poppe, Bruce; Pylkas, Katri; Radice, Paolo; Rahman, Nazneen; Johanna, Rantala; Rappaport, Christine; Rennert, Gad; Richardson, Andrea; Robson, Mark; Romieu, Isabelle; Rudolph, Anja; Rutgers, Emiel J.; Sanchez, Maria-Jose; Santella, Regina M.; Sawyer, Elinor J.; Schmidt, Daniel F.; Schmidt, Marjanka K.; Schmutzler, Rita K.; Schumacher, Fredrick; Scott, Rodney; Senter, Leigha; Sharma, Priyanka; Simard, Jacques; Singer, Christian F.; Sinilnikova, Olga M.; Soucy, Penny; Southey, Melissa; Steinemann-Askmalm, Doris; Stoppa-Lyonnet, Dominique; Swerdlow, Anthony; Szabo, Csilla I.; Tamimi, Rulla; Tapper, William; Teixeira, Manuel R.; Teo, Soo-Hwang; Terry, Mary B.; Thomassen, Mads; Thompson, Deborah; Tihomirova, Laima; Toland, Amanda Ewart; Tollenaar, Robert A.E.M.; Tomlinson, Ian; Truong, Therese; Tsimiklis, Helen; Teule, Alex; Tumino, Rosario; Tung, Nadine; Turnbull, Clare; Ursin, Giski; Van Deurzen, Carolien H.M.; Jansen van Rensburg, Elizabeth; Varon-Mateeva, Raymonda; Wang, Zhaoming; Wang-Gohrke, Shan; Weiderpass, Elisabete; Weitzel, Jeffrey N.; Whittemore, Alice; Wildiers, Hans; Winqvist, Robert; Yang, Xiaohong R.; Yannoukakos, Drakoulis; Yao, Song; Zamora, M. Pilar; Zheng, Wei; Hall, Per; Kraft, Peter; Vachon, Celine; Slager, Susan; Chenevix-Trench, Georgia; Pharoah, Paul D.P.; Monteiro, Alvaro A.N.; Garcıa-Closas, Montserrat; Easton, Douglas F.; Antoniou, Antonis C. (Nature Publishing Group, 2016-04-27)
    Common variants in 94 loci have been associated with breast cancer including 15 loci with genome-wide significant associations (Po5 10 8) with oestrogen receptor (ER)-negative breast cancer and BRCA1-associated breast ...
  • Identification of independent association signals and putative functional variants for breast cancer risk through fine-scale mapping of the 12p11 locus 
    Zeng, Chenjie; Guo, Xingyi; Long, Jirong; Kuchenbaecker, Karoline B.; Droit, Arnaud; Michailidou, Kyriaki; Ghoussaini, Maya; Kar, Siddhartha; Freeman, Adam; Hopper, John L.; Milne, Roger L.; Bolla, Manjeet K.; Wang, Qin; Dennis, Joe; Agata, Simona; Ahmed, Shahana; Aittomäki, Kristiina; Andrulis, Irene L.; Anton-Culver, Hoda; Antonenkova, Natalia N.; Arason, Adalgeir; Arndt, Volker; Arun, Banu K.; Arver, Brita; Bacot, Francois; Barrowdale, Daniel; Baynes, Caroline; Beeghly-Fadiel, Alicia; Benitez, Javier; Bermisheva, Marina; Blomqvist, Carl; Blot, William J.; Bogdanova, Natalia V.; Bojesen, Stig E.; Bonanni, Bernardo; Borresen-Dale, Anne-Lise; Brand, Judith S.; Brauch, Hiltrud; Brennan, Paul; Brenner, Hermann; Broeks, Annegien; Bruning, Thomas; Burwinkel, Barbara; Buys, Saundra S.; Cai, Qiuyin; Caldes, Trinidad; Campbell, Ian; Carpenter, Jane; Chang-Claude, Jenny; Choi, Ji-Yeob; Claes, Kathleen B.M.; Clarke, Christine; Cox, Angela; Cross, Simon S.; Czene, Kamila; Daly, Mary B.; De la Hoya, Miguel; De Leeneer, Kim; Devilee, Peter; Diez, Orland; Domchek, Susan M.; Doody, Michele; Dorfling, Cecilia Maria; Dork, Thilo; Dos-Santos-Silva, Isabel; Dumont, Martine; Dwek, Miriam; Dworniczak, Bernd; Egan, Kathleen; Einbeigi, Zakaria; Ejlertsen, Bent; Ellis, Steve; Frost, Debra; Lalloo, Fiona; Fasching, Peter A.; Figueroa, Jonine; Flyger, Henrik; Friedlander, Michael; Friedman, Eitan; Gambino, Gaetana; Gao, Yu-Tang; Garber, Judy; García-Closas, Montserrat; Gehrig, Andrea; Damiola, Francesca; Lesueur, Fabienne; Mazoyer, Sylvie; GEMO Study Collaborators; Giles, Graham G.; Godwin, Andrew K.; Goldgar, David E.; Gonzalez-Neira, Anna; Greene, Mark H.; Guenel, Pascal; Haiman, Christopher A.; Hallberg, Emily; Hamann, Ute; Hansen, Thomas V. O.; Hart, Steven; Hartikainen, Jaana M.; Hartman, Mikael; Hassan, Norhashimah; Healey, Sue; Hogervorst, Frans B.L.; Verhoef, Senno; HEBON; Hendricks, Carolyn B.; Hillemanns, Peter; Hollestelle, Antoinette; Hulick, Peter J.; Hunter, David J.; Imyanitov, Evgeny N.; Isaacs, Claudine; Ito, Hidemi; Jakubowska, Anna; Janavicius, Ramunas; Jaworska-Bieniek, Katarzyna; Jensen, Uffe Birk; John, Esther M.; Beauparlant, Charles Joly; Jones, Michael; Kabisch, Maria; Kang, Daehee; Karlan, Beth Y.; Kauppila, Saila; Kerin, Michael J.; Khan, Sofia; Knight, Julia A.; Konstantopoulou, Irene; Kraft, Peter; Kwong, Ava; Laitman, Yael; Lambrechts, Diether; Lazaro, Conxi; Le Marchand, Loic; Lee, Chuen Neng; Lee, Min Hyuk; Lester, Jenny; Li, Jingmei; Liljegren, Annelie; Lindblom, Annika; Lophatananon, Artitaya; Lubinski, Jan; Mai, Phuong L.; Mannermaa, Arto; Manoukian, Siranoush; Margolin, Sara; Marme, Frederik; Matsuo, Keitaro; McGuffog, Lesley; Meindl, Alfons; Menegaux, Florence; Montagna, Marco; Muir, Kenneth; Mulligan, Anna Marie; Nathanson, Katherine L.; Nevanlinna, Heli; Newcomb, Polly A.; Nord, Silje; Nussbaum, Robert L.; Offit, Kenneth; Olah, Edith; Olopade, Olufunmilayo I.; Olswold, Curtis; Osorio, Ana; Park-Simon, Tjoung-Won; Paulsson-Karlsson, Ylva; Peeters, Stephanie; Peterlongo, Paolo; Peto, Julian; Pfeiler, Georg; Phelan, Catherine M.; Presneau, Nadege; Radice, Paolo; Rahman, Nazneen; Ramus, Susan J.; Rashid, Muhammad Usman; Rennert, Gad; Rhiem, Kerstin; Rudolph, Anja; Salani, Ritu; Sangrajrang, Suleeporn; Sawyer, Elinor J.; Schmidt, Marjanka K.; Schmutzler, Rita K.; Schoemaker, Minouk J.; Schurmann, Peter; Seynaeve, Caroline; Shen, Chen-Yang; Shrubsole, Martha J.; Steinemann, Doris; Swerdlow, Anthony; Szabo, Csilla I.; Tchatchou, Sandrine; Teixeira, Manuel R.; Teo, Soo H.; Terry, Mary Beth; Tessier, Daniel C.; Teule, Alex; Thomassen, Mads; Tihomirova, Laima; Toland, Amanda Ewart; Tung, Nadine; Turnbull, Clare; Van den Ouweland, Ans M.W.; Jansen van Rensburg, Elizabeth; Ven den Berg, David; Vijai, Joseph; Wang-Gohrke, Shan; Weitze, Jeffrey N.; Whittemore, Alice S.; Winqvist, Robert; Wu, Anna H.; Yannoukakos, Drakoulis; Yu, Jyh-Cherng; Pharoah, Paul D.P.; Hall, Per; Chenevix-Trench, Georgia; KConFab; AOCS Investigators; Dunning, Alison M.; Simard, Jacques; Couch, Fergus J.; Antoniou, Antonis C.; Easton, Douglas F.; Zheng, Wei (BioMed Central, 2016-06-21)
    BACKGROUND : Multiple recent genome-wide association studies (GWAS) have identified a single nucleotide polymorphism (SNP), rs10771399, at 12p11 that is associated with breast cancer risk. METHOD : We performed a fine-scale ...
  • Identification of naturally occurring hybrids between two overexploited sciaenid species along the South African coast 
    Mirimin, L.; Kerwath, S.E.; Macey, B.; Bester-Van der Merwe, A.; Lamberth, S.J.; Bloomer, Paulette; Roodt-Wilding, R. (Elsevier, 2014-07)
    Hybridization between fish species can play a significant role in evolutionary processes and can influence management and conservation planning, however, this phenomenon has been widely understudied, especially in marine ...
  • Identification of six new susceptibility loci for invasive epithelial ovarian cancer 
    Kuchenbaecker, Karoline B.; Ramus, Susan J.; Tyrer, Jonathan; Lee, Andrew; Shen, Howard C.; Beesley, Jonathan; Lawrenson, Kate; McGuffog, Lesley; Healey, Sue; Lee, Janet M.; Spindler, Tassja J.; Lin, Yvonne G.; Pejovic, Tanja; Bean, Yukie; Li, Qiyuan; Coetzee, Simon; Hazelett, Dennis; Miron, Alexander; Southey, Melissa; Terry, Mary Beth; Goldgar, David E.; Buys, Saundra S.; Janavicius, Ramunas; Dorfling, Cecilia Maria; Jansen van Rensburg, Elizabeth; Neuhausen, Susan L.; Ding, Yuan Chun; Hansen, Thomas V.O.; Jønson, Lars; Gerdes, Anne-Marie; Ejlertsen, Bent; Barrowdale, Daniel; Dennis, Joe; Benitez, Javier; Osorio, Ana; Garcia, Maria Jose; Komenaka, Ian; Weitzel, Jeffrey N.; Ganschow, Pamela; Peterlongo, Paolo; Bernard, Loris; Viel, Alessandra; Bonanni, Bernardo; Peissel, Bernard; Manoukian, Siranoush; Radice, Paolo; Papi, Laura; Ottini, Laura; Fostira, Florentia; Konstantopoulou, Irene; Garber, Judy; Frost, Debra; Perkins, Jo; Platte, Radka; Ellis, Steve; EMBRACE; Godwin, Andrew K.; Schmutzler, Rita Katharina; Meindl, Alfons; Engel, Christoph; Sutter, Christian; Sinilnikova, Olga M.; GEMO Study Collaborators; Damiola, Francesca; Mazoyer, Sylvie; Stoppa-Lyonnet, Dominique; Claes, Kathleen; De Leeneer, Kim; Kirk, Judy; Rodriguez, Gustavo C.; Piedmonte, Marion; O’Malley, David M.; De la Hoya, Miguel; Caldes, Trinidad; Aittomäki, Kristiina; Nevanlinna, Heli; Collée, J. Margriet; Rookus, Matti A.; Oosterwijk, Jan C.; Breast Cancer Family Registry; Tihomirova, Laima; Tung, Nadine; Hamann, Ute; Isaccs, Claudine; Tischkowitz, Marc; Imyanitov, Evgeny N.; Caligo, Maria A.; Campbell, Ian G.; Hogervorst, Frans B. L.; HEBON; Olah, Edith; Diez, Orland; Blanco, Ignacio; Brunet, Joan; Lazaro, Conxi; Pujana, Miquel Angel; Jakubowska, Anna; Gronwald, Jacek; Lubinski, Jan; Sukiennicki, Grzegorz; Barkardottir, Rosa B.; Plante, Marie; Simard, Jacques; Soucy, Penny; Montagna, Marco; Tognazzo, Silvia; Teixeira, Manuel R.; KConFab Investigators; Pankratz, Vernon S.; Wang, Xianshu; Lindor, Noralane; Szabo, Csilla I.; Kauff, Noah; Vijai, Joseph; Aghajanian, Carol A.; Pfeiler, Georg; Berger, Andreas; Singer, Christian F.; Tea, Muy-Kheng; Phelan, Catherine M.; Greene, Mark H.; Mai, Phuong L.; Rennert, Gad; Mulligan, Anna Marie; Tchatchou, Sandrine; Andrulis, Irene L.; Glendon, Gord; Toland, Amanda Ewart; Jensen, Uffe Birk; Kruse, Torben A.; Thomassen, Mads; Bojesen, Anders; Zidan, Jamal; Friedman, Eitan; Laitman, Yael; Soller, Maria; Liljegren, Annelie; Arver, Brita; Einbeigi, Zakaria; Stenmark-Askmalm, Marie; Olopade, Olufunmilayo I.; Nussbaum, Robert L.; Rebbeck, Timothy R.; Nathanson, Katherine L.; Domchek, Susan M.; Lu, Karen H.; Karlan, Beth Y.; Walsh, Christine; Lester, Jenny; Australian Cancer Study (Ovarian Cancer Investigators); Australian Ovarian Cancer Study Group; Hein, Alexander; Ekici, Arif B.; Beckmann, Matthias W.; Fasching, Peter A.; Lambrechts, Diether; Van Nieuwenhuysen, Els; Vergote, Ignace; Lambrechts, Sandrina; Dicks, Ed; Doherty, Jennifer A.; Wicklund, Kristine G.; Rossing, Mary Anne; Rudolph, Anja; Chang-Claude, Jenny; Wang-Gohrke, Shan; Eilber, Ursula; Moysich, Kirsten B.; Odunsi, Kunle; Sucheston, Lara; Lele, Shashi; Wilkens, Lynne R.; Goodman, Marc T.; Thompson, Pamela J.; Shvetsov, Yurii B.; Runnebaum, Ingo B.; Dürst, Matthias; Hillemanns, Peter; Dörk, Thilo; Antonenkova, Natalia; Bogdanova, Natalia; Leminen, Arto; Pelttari, Liisa M.; Butzow, Ralf; Modugno, Francesmary; Kelley, Joseph L.; Edwards, Robert P.; Ness, Roberta B.; Du Bois, Andreas; Heitz, Florian; Schwaab, Ira; Harter, Philipp; Matsuo, Keitaro; Hosono, Satoyo; Orsulic, Sandra; Jensen, Allan; Kjaer, Susanne Kruger; Hogdall, Estrid; Hasmad, Hanis Nazihah; Azmi, Mat Adenan Noor; Teo, Soo-Hwang; Woo, Yin-Ling; Fridley, Brooke L.; Goode, Ellen L.; Cunningham, Julie M.; Vierkant, Robert A.; Bruinsma, Fiona; Giles, Graham G.; Liang, Dong; Hildebrandt, Michelle A.T.; Wu, Xifeng; Levine, Douglas A.; Bisogna, Maria; Berchuck, Andrew; Iversen, Edwin S.; Schildkraut, Joellen M.; Concannon, Patrick; Weber, Rachel Palmieri; Cramer, Daniel W.; Terry, Kathryn L.; Poole, Elizabeth M.; Tworoger, Shelley S.; Bandera, Elisa V.; Orlow, Irene; Olson, Sara H.; Krakstad, Camilla; Salvesen, Helga B.; Tangen, Ingvild L.; Bjorge, Line; Van Altena, Anne M.; Aben, Katja K.H.; Kiemeney, Lambertus A.; Massuger, Leon F.A.G.; Kellar, Melissa; Brooks-Wilson, Angela; Kelemen, Linda E.; Cook, Linda S.; Le, Nhu D.; Cybulski, Cezary; Yang, Hannah; Lissowska, Jolanta; Brinton, Louise A.; Wentzensen, Nicolas; Hogdall, Claus; Lundvall, Lene; Nedergaard, Lotte; Baker, Helen; Song, Honglin; Eccles, Diana M.; McNeish, Ian; Paul, James; Carty, Karen; Siddiqui, Nadeem; Glasspool, Rosalind; Whittemore, Alice S.; Rothstein, Joseph H.; McGuire, Valerie; Sieh, Weiva; Ji, Bu-Tian; Zheng, Wei; Shu, Xiao-Ou; Gao, Yu-Tang; Rosen, Barry; Risch, Harvey A.; McLaughlin, John R.; Narod, Steven A.; Monteiro, Alvaro N.; Chen, Ann; Lin, Hui-Yi; Permuth-Wey, Jenny; Sellers, Thomas A.; Tsai, Ya-Yu; Chen, Zhihua; Ziogas, Argyrios; Anton-Culver, Hoda; Gentry-Maharaj, Aleksandra; Menon, Usha; Harrington, Patricia; Lee, Alice W.; Wu, Anna H.; Pearce, Celeste L.; Coetzee, Gerry; Pike, Malcolm C.; Dansonka-Mieszkowska, Agnieszka; Timorek, Agnieszka; Rzepecka, Iwona K.; Kupryjanczyk, Jolanta; Freedman, Matt; Noushmehr, Houtan; Easton, Douglas F.; Offit, Kenneth; Couch, Fergus J.; Gayther, Simon; Pharoah, Paul P.; Antoniou, Antonis C.; Chenevix-Trench, Georgia; Consortium of Investigators of Modifiers of BRCA1; Consortium of Investigators of Modifiers of BRCA2 (Nature Publishing Group, 2015-02)
    Genome-wide association studies (GWAS) have identified 12 epithelial ovarian cancer (EOC) susceptibility alleles. The pattern of association at these loci is consistent in BRCA1 and BRCA2 mutation carriers who are at high ...
  • Identification of the Eucalyptus grandis chitinase gene family and expression characterization under different biotic stress challenges 
    Tobias, Peri A.; Christie, Nanette; Naidoo, Sanushka; Guest, David I.; Kulheim, Carsten (Oxford University Press, 2017-05)
    Eucalyptus grandis (W. Hill ex Maiden) is an Australian Myrtaceae tree grown for timber in many parts of the world and for which the annotated genome sequence is available. Known to be susceptible to a number of pests and ...
  • Identification of toxigenic Microcystis strains after incidents of wild animal mortalities in the Kruger National Park, South Africa 
    Oberholster, Paul Johan; Myburgh, Jan G.; Govender, Dhanashree (Danny); Bengis, Roy G.; Botha, Anna-Maria (Elsevier, 2009)
    The eutrophic process potentially caused by a high urine and faecal load resulting from an unusually high hippopotamus(Hippopotamusamphibious) density in the Nhlanganzwane Dam, Kruger National Park, South Africa, triggered ...
  • Illumina error correction near highly repetitive DNA regions improves de novo genome assembly 
    Heydari, Mahdi; Miclotte, Giles; Van de Peer, Yves; Fostier, Jan (BioMed Central, 2019-06-03)
    BACKGROUND : Several standalone error correction tools have been proposed to correct sequencing errors in Illumina data in order to facilitate de novo genome assembly. However, in a recent survey, we showed that ...
  • IMA genome - F14 : Draft genome sequences of Penicillium roqueforti, Fusarium sororula, Chrysoporthe puriensis, and Chalaropsis populi 
    Van der Nest, Magrieta Aletta; Chavez, Renato; De Vos, Lieschen; Duong, Tuan A.; Gil-Duran, Carlos; Ferreira, Maria Alves; Lane, Frances Alice; Levican, Gloria; Santana, Quentin C.; Steenkamp, Emma Theodora; Suzuki, Hiroyuki; Tello, Mario; Rakoma, Jostina R.; Vaca, Inmaculada; Valdes, Natalia; Wilken, Pieter Markus; Wingfield, Michael J.; Wingfield, Brenda D. (International Mycological Association, 2021-03-05)
    Draft genomes of Penicillium roqueforti, Fusarium sororula, Chalaropsis populi, and Chrysoporthe puriensis are presented. Penicillium roqueforti is a model fungus for genetics, physiological and metabolic studies, as well ...
  • IMA Genome - F15 : Draft genome assembly of Fusarium pilosicola, Meredithiella fracta, Niebla homalea, Pyrenophora teres hybrid WAC10721, and Teratosphaeria viscida 
    Duong, Tuan A.; Aylward, Janneke; Ametrano, Claudio Gennaro; Poudel, Barsha; Santana, Quentin C.; Wilken, Pieter Markus; Martin, Anke; Arun‑Chinnappa, Kiruba Shankari; De Vos, Lieschen; DiStefano, Isabel; Grewe, Felix; Huhndorf, Sabine; Lumbsch, Helge Thorsten; Rakoma, Jostina R.; Poudel, Barsha; Steenkamp, Emma Theodora; Sun, Yukun; Van der Nest, Magrieta Aletta; Wingfield, Michael J.; Yilmaz, Neriman; Wingfield, Brenda D. (International Mycological Association, 2021-10-13)
    No abstract available.
  • IMA Genome-F 11 : draft genome sequences of Fusarium xylarioides, Teratosphaeria gauchensis and T. zuluensis and genome annotation for Ceratocystis fimbriata 
    Wingfield, Brenda D.; Fourie, Arista; Simpson, Melissa Claire; Bushula-Njah, Vuyiswa; Aylward, Janneke; Barnes, Irene; Coetzee, Martin Petrus Albertus; Dreyer, Leanne Laurette; Duong, Tuan A.; Geiser, David M.; Roets, Francois; Steenkamp, Emma Theodora; Van der Nest, Magrieta Aletta; Van Heerden, Carel J.; Wingfield, Michael J. (International Mycological Association, 2019)
    Draft genomes of the fungal species Fusarium xylarioides, Teratosphaeria gauchensis and T. zuluensis are presented. In addition an annotation of the genome of Ceratocystis fimbriata is presented. Overall these genomes ...
  • IMA Genome-F13 : draft genome sequences of Ambrosiella cleistominuta, Cercospora brassicicola, C. citrullina, Physcia stellaris, and Teratosphaeria pseudoeucalypti 
    Wilken, Pieter Markus; Aylward, Janneke; Chand, Ramesh; Grewe, Felix; Lane, Frances Alice; Sinha, Shagun; Ametrano, Claudio; Distefano, Isabel; Divakar, Pradeep K.; Duong, Tuan A.; Huhndorf, Sabine; Kharwar, Ravindra N.; Lumbsch, H. Thorsten; Navathe, Sudhir; Perez, Carlos A.; Ramirez-Berrutti, Nazaret; Sharma, Rohit; Sun, Yukun; Wingfield, Brenda D.; Wingfield, Michael J. (BioMed Central, 2020-09)
    Draft genomes of the fungal species Ambrosiella cleistominuta, Cercospora brassicicola, C. citrullina, Physcia stellaris, and Teratosphaeria pseudoeucalypti are presented. Physcia stellaris is an important lichen forming ...
  • Impact of DNA extraction on whole genome sequencing analysis for characterization and relatedness of Shiga toxin‑producing Escherichia coli isolates 
    Nouws, Stephanie; Bogaerts, Bert; Verhaegen, Bavo; Denayer, Sarah; Pierard, Denis; Marchal, Kathleen; Roosens, Nancy H.C.; Vanneste, Kevin; De Keersmaecker, Sigrid C.J. (Nature Publishing Group, 2020-09-04)
    Whole genome sequencing (WGS) has proven to be the ultimate tool for bacterial isolate characterization and relatedness determination. However, standardized and harmonized workflows, e.g. for DNA extraction, are required ...
  • Impact of intercept trap type on plume structure : a potential mechanism for differential performance of intercept trap designs for Monochamus species 
    Bouwer, Marc Clement; MacQuarrie, C.J.K. (Chris); Aguirre-Gil, O.J. (Oniel); Slippers, Bernard; Allison, Jeremy D. (Springer, 2020-06)
    Studies have demonstrated that semiochemical-baited intercept traps differ in their performance for sampling insects, but we have an incomplete understanding of how and why intercept trap design effects vary among insects. ...
  • Impact of metagenomic DNA extraction procedures on the identifiable endophytic bacterial diversity in Sorghum bicolor (L. Moench) 
    Maropola, Mapula Kgomotso Annah; Ramond, Jean-Baptiste; Trindade, Marla Iris (Elsevier, 2015-05)
    Culture-independent studies rely on the quantity and quality of the extracted environmental metagenomic DNA (mDNA). To fully access the plant tissue microbiome, the extracted plant mDNA should allow optimal PCR applications ...