Browsing Research Articles (Forestry and Agricultural Biotechnology Institute (FABI)) by Subject "Paraburkholderia"

Browsing Research Articles (Forestry and Agricultural Biotechnology Institute (FABI)) by Subject "Paraburkholderia"

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  • Genome data provides high support for generic boundaries in Burkholderia sensu lato 
    Beukes, Chrizelle Winsie; Palmer, Marike; Manyaka, Puseletso; Chan, Wai Yin; Avontuur, Juanita R.; Van Zyl, Elritha; Venter, S.N. (Stephanus Nicolaas); Steenkamp, Emma Theodora; Clum, Alicia; Pillay, Manoj; Reddy, T.B.K.; Daum, Chris; Shapiro, Nicole; Markowitz, Victor; Ivanova, Natalia; Kyrpides, Nikos; Woyke, Tanja; Blom, Jochem; Whitman, William B. (Frontiers Research Foundation, 2017-06)
    Although the taxonomy of Burkholderia has been extensively scrutinized, significant uncertainty remains regarding the generic boundaries and composition of this large and heterogeneous taxon. Here we used the amino acid ...
  • Paraburkholderia strydomiana sp. nov. and Paraburkholderia steynii sp. nov.: rhizobial symbionts of the fynbos legume Hypocalyptus sophoroides 
    Beukes, Chrizelle Winsie; Steenkamp, Emma Theodora; Van Zyl, Elritha; Avontuur, Juanita R.; Chan, Wai Yin; Hassen, Ahmed Idris; Palmer, Marike; Mthombeni, Lunghile S.; Phalane, Francina L.; Sereme, T. Karabo; Venter, S.N. (Stephanus Nicolaas) (Springer, 2019-09)
    Please read abstract in the article.
  • Practically delineating bacterial species with genealogical concordance 
    Venter, S.N. (Stephanus Nicolaas); Palmer, Marike; Beukes, Chrizelle Winsie; Chan, Wai Yin; Shin, Giyoon; Van Zyl, Elritha; Seale, Tarren; Coutinho, Teresa A.; Steenkamp, Emma Theodora (Springer, 2017-10)
    Bacterial species are commonly defined by applying a set of predetermined criteria, including DNA–DNA hybridization values, 16S rRNA gene sequence similarity, phenotypic data as well as genome-based criteria such as average ...
  • Trinickia dabaoshanensis sp. nov., a new name for a lost species 
    Estrada-de los Santos, Paulina; Palmer, Marike; Steenkamp, Emma Theodora; Maluk, Marta; Beukes, Chrizelle Winsie; Hirsch, Ann M.; James, Euan K.; Venter, S.N. (Stephanus Nicolaas) (Springer, 2019-11)
    “Burkholderia dabaoshanensis” was described in 2012. Although the name was effectively published, it could not be validly published, because the description provided in the original paper did not comply with the Rule 27 ...
  • Whole genome analysis suggests that Burkholderia sensu lato contains two additional novel genera (Mycetohabitans gen. nov., and Trinickia gen. nov.) : implications for the evolution of diazotrophy and nodulation in the Burkholderiaceae 
    Estrada-de los Santos, Paulina; Palmer, Marike; Chávez-Ramírez, Belén; Beukes, Chrizelle Winsie; Steenkamp, Emma Theodora; Briscoe, Leah; Khan, Noor; Maluk, Marta; Marcel Lafos; Humm, Ethan; Arrabit, Monique; Crook, Matthew; Gross, Eduardo; Simon, Marcelo F.; Dos Reis Junior, Fabio Bueno; Whitman, William B.; Shapiro, Nicole; Poole, Philip S.; Hirsch, Ann M.; Venter, S.N. (Stephanus Nicolaas); James, Euan K. (Elsevier, 2018-08-01)
    Burkholderia sensu lato is a large and complex group, containing pathogenic, phytopathogenic, symbiotic and non-symbiotic strains from a very wide range of environmental (soil, water, plants, fungi) and clinical (animal, ...