RESTseq – efficient benchtop population genomics with RESTriction fragment SEQuencing

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Authors

Stolle, Eckart
Moritz, Robin F.A.

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Publisher

Public Library of Science

Abstract

We present RESTseq, an improved approach for a cost efficient, highly flexible and repeatable enrichment of DNA fragments from digested genomic DNA using Next Generation Sequencing platforms including small scale Personal Genome sequencers. Easy adjustments make it suitable for a wide range of studies requiring SNP detection or SNP genotyping from fine-scale linkage mapping to population genomics and population genetics also in non-model organisms. We demonstrate the validity of our approach by comparing two honeybee and several stingless bee samples.

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Keywords

RESTseq, SNP detection, SNP genotyping, Next generation sequencing (NGS)

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Citation

Stolle E, Moritz RFA (2013) RESTseq – Efficient Benchtop Population Genomics with RESTriction Fragment SEQuencing. PLoS ONE 8(5): e63960. DOI: 10.1371/journal.pone.0063960