Genome sequences of Knoxdaviesia capensis and K. proteae (Fungi : Ascomycota) from Protea trees in South Africa

dc.contributor.authorAylward, Janneke
dc.contributor.authorSteenkamp, Emma Theodora
dc.contributor.authorDreyer, Leanne Laurette
dc.contributor.authorRoets, Francois
dc.contributor.authorWingfield, Brenda D.
dc.contributor.authorWingfield, Michael J.
dc.date.accessioned2016-07-20T05:34:54Z
dc.date.available2016-07-20T05:34:54Z
dc.date.issued2016-02-29
dc.descriptionAdditional file 1: Table S1. Associated MIGS record for K. capensis.en_ZA
dc.descriptionAdditional file 2: Table S2. Associated MIGS record for K. proteae.en_ZA
dc.descriptionAdditional file 3: Table S3. Sequenced Sordariomycete fungi used as evidence for genome annotations.en_ZA
dc.description.abstractTwo closely related ophiostomatoid fungi, Knoxdaviesia capensis and K. proteae, inhabit the fruiting structures of certain Protea species indigenous to southern Africa. Although K. capensis occurs in several Protea hosts, K. proteae is confined to P. repens. In this study, the genomes of K. capensis CBS139037 and K. proteae CBS140089 are determined. The genome of K. capensis consists of 35,537,816 bp assembled into 29 scaffolds and 7940 predicted protein-coding genes of which 6192 (77.98 %) could be functionally classified. K. proteae has a similar genome size of 35,489,142 bp that is comprised of 133 scaffolds. A total of 8173 protein-coding genes were predicted for K. proteae and 6093 (74.55 %) of these have functional annotations. The GC-content of both genomes is 52.8 %.en_ZA
dc.description.departmentGeneticsen_ZA
dc.description.departmentMicrobiology and Plant Pathologyen_ZA
dc.description.librarianam2016en_ZA
dc.description.sponsorshipThe National Research Foundation (NRF) and the Department of Science and Technology/NRF Centre of Excellence in Tree Health Biotechnology.en_ZA
dc.description.urihttp://www.sherpa.ac.uk/romeo/issn/1944-3277/en_ZA
dc.identifier.citationAylward, J, Steenkamp, ET, Dreyer, LL, Roets, F, Wingfield, BD & Wingfield, MJ 2016, 'Genome sequences of Knoxdaviesia capensis and K. proteae (Fungi : Ascomycota) from Protea trees in South Africa', Standards in Genomic Sciences, vol. 11, art. #22, pp. 1-7.en_ZA
dc.identifier.issn1944-3277
dc.identifier.other10.1186/s40793-016-0139-9
dc.identifier.urihttp://hdl.handle.net/2263/55981
dc.language.isoenen_ZA
dc.publisherBioMed Centralen_ZA
dc.rights© 2016 Aylward et al. Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License.en_ZA
dc.subjectKnoxdaviesiaen_ZA
dc.subjectGondwanamycetaceaeen_ZA
dc.subjectMicroascalesen_ZA
dc.subjectOphiostomatoid fungien_ZA
dc.subjectProteaen_ZA
dc.titleGenome sequences of Knoxdaviesia capensis and K. proteae (Fungi : Ascomycota) from Protea trees in South Africaen_ZA
dc.typeArticleen_ZA

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