Ophiostomatoid fungi associated with conifer-infesting beetles and their phoretic mites in Yunnan, China

dc.contributor.authorChang, Runlei
dc.contributor.authorDuong, Tuan A.
dc.contributor.authorTaerum, Stephen J.
dc.contributor.authorWingfield, Michael J.
dc.contributor.authorZhou, Xudong
dc.contributor.authorDe Beer, Z. Wilhelm
dc.contributor.emailwilhelm.debeer@fabi.up.ac.zaen_ZA
dc.date.accessioned2018-03-12T07:42:04Z
dc.date.available2018-03-12T07:42:04Z
dc.date.issued2017-12-21
dc.descriptionFigure S1. Map of Yunnan Province in China showing the sites and tree hosts from which samples were collected during the three surveys in 2001, 2002 and 2010.en_ZA
dc.descriptionFigure S2. ML trees of the genus Graphium generated from DNA sequences of the ITS and BT regions. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S3. ML trees of the genus Sporothrix generated from DNA sequences of ITS and BT regions. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S4. ML trees of the O. ips complex generated from DNA sequences of ITS and BT regions. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S5. ML trees of the O. piceae complex generated from DNA sequences of BT and EF regions. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S6. ML tree of the O. quercus complex generated from DNA sequences of ITS region. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S7. ML tree of the O. quercus complex generated from DNA sequences of BT region. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S8. ML tree of the O. quercus complex generated from DNA sequences of EF region. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S9. ML trees of the L. procerum complex generated from DNA sequences of BT, EF and CAL regions. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S10. ML trees of the G. galeiformis complex generated from DNA sequences of BT and EF regions. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionFigure S11. ML trees of the L. lundbergii complex generated from DNA sequences of BT and EF regions. Bold branches indicate posterior probabilities values ≥ 0.95. Bootstrap values ≥ 70 % are recorded at nodes as ML/MP. T = ex-type isolates.en_ZA
dc.descriptionTable S1. Numbers of ophiostomatoid fungal isolates obtained from different mite species in this study.en_ZA
dc.descriptionTable S2. Haplotypes of Ophiostoma quercus.en_ZA
dc.descriptionTable S3. Haplotypes of Ophiostoma tsotsi.en_ZA
dc.description.abstractThe Ophiostomatales is an Ascomycete order of fungi that accommodates several tree pathogens and many species that degrade wood. These fungi are commonly vectored by Scolytine bark and ambrosia beetles. In recent years it has also been shown that hyperphoretic mites on these beetles can vector some Ophiostomatales. Little is known regarding the Ophiostomatales in China and we have consequently explored the diversity of these fungi associated with conifer-infesting beetles and mites in Yunnan province. Galleries and beetles were collected for 17 beetle species, while 13 mite species were obtained from six of these beetle species. Collectively, 340 fungal isolates were obtained, 45 from beetles, 184 from mites, 56 from galleries and 55 isolates where the specific niche was not clear. DNA sequences for five gene regions (ITS, LSU, BT, EF, and CAL) were determined for fungal isolates representing different morphological groups. Phylogenetic analyses confirmed the presence of 19 fungal taxa, including five novel species described here as Ophiostoma acarorum sp. nov., Ophiostoma brevipilosi sp. nov., Graphilbum kesiyae sp. nov., Graphilbum puerense sp. nov., and Leptographium ningerense sp. nov. Ophiostoma ips was the most frequently isolated species, representing approximately 31% of all isolates. Six of 19 taxa were present on mites, beetles and in the galleries of the beetles, while three species were found on mites and galleries. Two species were found only on mites and one species only on a beetle. Although the numbers of beetles and mites were insufficient to provide statistical inferences, this study confirmed that mites are important vectors of the Ophiostomatales in China. We hypothesize that these mites are most likely responsible for horizontal transfer of fungal species between galleries of different beetle species. The fact that half of the fungal species found were new to science, suggests that the forests of east Asia include many undescribed Ophiostomatales yet to be discovered.en_ZA
dc.description.departmentForestry and Agricultural Biotechnology Institute (FABI)en_ZA
dc.description.departmentGeneticsen_ZA
dc.description.departmentMicrobiology and Plant Pathologyen_ZA
dc.description.librarianam2018en_ZA
dc.description.sponsorshipMembers of Tree Protection and Cooperation Programme (TPCP), Center of Excellence in Tree Health Biotechnology (CTHB), the National Research Foundation (NRF), the Department of Science and Technology (DST)/NRF and the University of Pretoria, South Africa.en_ZA
dc.description.urihttps://mycokeys.pensoft.neten_ZA
dc.identifier.citationChang R, Duong TA, Taerum SJ, Wingfield MJ, Zhou X, de Beer ZW (2017) Ophiostomatoid fungi associated with conifer-infesting beetles and their phoretic mites in Yunnan, China. MycoKeys 28: 19–64. https://DOI.org/10.3897/mycokeys.28.21758.en_ZA
dc.identifier.issn1314-4057 (print)
dc.identifier.issn1314-4049 (online)
dc.identifier.other10.3897/mycokeys.28.21758
dc.identifier.urihttp://hdl.handle.net/2263/64194
dc.language.isoenen_ZA
dc.publisherPensoft Publishersen_ZA
dc.rightsCopyright Runlei Chang et al. This is an open access article distributed under the terms of the Creative Commons Attribution License (CC BY 4.0).en_ZA
dc.subjectSymbionten_ZA
dc.subjectSpecies diversityen_ZA
dc.subjectFungal vectoren_ZA
dc.subjectOphiostoma quercusen_ZA
dc.titleOphiostomatoid fungi associated with conifer-infesting beetles and their phoretic mites in Yunnan, Chinaen_ZA
dc.typeArticleen_ZA

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