The genome of Eucalyptus grandis

Myburg, Alexander Andrew; Grattapaglia, Dario; Tuskan, Gerald A.; Hellsten, Uffe; Hayes, Richard D.; Grimwood, Jane; Jenkins, Jerry; Lindquist, Erika; Tice, Hope; Bauer, Diane; Goodstein, David M.; Dubchak, Inna; Poliakov, Alexandre; Mizrachi, Eshchar; Kullan, Anand Raj Kumar; Hussey, S.G. (Steven); Pinard, Desre; Van der Merwe, Karen; Singh, Pooja; Van Jaarsveld, Ida; Silva-Junior, Orzenil B.; Togawa, Roberto C.; Pappas, Marilia R.; Faria, Danielle A.; Sansaloni, Carolina P.; Petroli, Cesar D.; Yang, Xiaohan; Ranjan, Priya; Tschaplinski, Timothy J.; Ye, Chu-Yu; Li, Ting; Sterck, Lieven; Vanneste, Kevin; Murat, Florent; Soler, Marcal; Clemente, Helene San; Saidi, Naijib; Cassan-Wang, Hua; Dunand, Christophe; Hefer, Charles Amadeus; Bornberg-Bauer, Erich; Kersting, Anna R.; Vining, Kelly; Amarasinghe, Vindhya; Ranik, Martin; Naithani, Sushma; Elser, Justin; Boyd, Alexander E.; Liston, Aaron; Spatafora, Joseph W.; Dharmwardhana, Palitha; Raja, Rajani; Sullivan, Christopher; Romanel, Elisson; Alves-Ferreira, Marcio; Kulheim, Carsten; Foley, William; Carocha, Victor; Paiva, Jorge; Kudrna, David; Brommonschenkel, Sergio H.; Pasquali, Giancarlo; Byrne, Margaret; Rigault, Philippe; Tibbits, Josquin; Spokevicius, Antanas; Jones, Rebecca C.; Steane, Dorothy A.; Vaillancourt, Rene E.; Potts, Brad M.; Joubert, Fourie; Barry, Kerrie; Pappas Jr, Georgios J.; Strauss, Steven H.; Jaiswal, Pankaj; Grima-Pettenati, Jacqueline; Salse, Jerome; Van de Peer, Yves; Rokhsar, Daniel S.; Schmutz, Jeremy

dc.contributor.author	Myburg, Alexander Andrew
dc.contributor.author	Grattapaglia, Dario
dc.contributor.author	Tuskan, Gerald A.
dc.contributor.author	Hellsten, Uffe
dc.contributor.author	Hayes, Richard D.
dc.contributor.author	Grimwood, Jane
dc.contributor.author	Jenkins, Jerry
dc.contributor.author	Lindquist, Erika
dc.contributor.author	Tice, Hope
dc.contributor.author	Bauer, Diane
dc.contributor.author	Goodstein, David M.
dc.contributor.author	Dubchak, Inna
dc.contributor.author	Poliakov, Alexandre
dc.contributor.author	Mizrachi, Eshchar
dc.contributor.author	Kullan, Anand Raj Kumar
dc.contributor.author	Hussey, S.G. (Steven)
dc.contributor.author	Pinard, Desre
dc.contributor.author	Van der Merwe, Karen
dc.contributor.author	Singh, Pooja
dc.contributor.author	Van Jaarsveld, Ida
dc.contributor.author	Silva-Junior, Orzenil B.
dc.contributor.author	Togawa, Roberto C.
dc.contributor.author	Pappas, Marilia R.
dc.contributor.author	Faria, Danielle A.
dc.contributor.author	Sansaloni, Carolina P.
dc.contributor.author	Petroli, Cesar D.
dc.contributor.author	Yang, Xiaohan
dc.contributor.author	Ranjan, Priya
dc.contributor.author	Tschaplinski, Timothy J.
dc.contributor.author	Ye, Chu-Yu
dc.contributor.author	Li, Ting
dc.contributor.author	Sterck, Lieven
dc.contributor.author	Vanneste, Kevin
dc.contributor.author	Murat, Florent
dc.contributor.author	Soler, Marcal
dc.contributor.author	Clemente, Helene San
dc.contributor.author	Saidi, Naijib
dc.contributor.author	Cassan-Wang, Hua
dc.contributor.author	Dunand, Christophe
dc.contributor.author	Hefer, Charles Amadeus
dc.contributor.author	Bornberg-Bauer, Erich
dc.contributor.author	Kersting, Anna R.
dc.contributor.author	Vining, Kelly
dc.contributor.author	Amarasinghe, Vindhya
dc.contributor.author	Ranik, Martin
dc.contributor.author	Naithani, Sushma
dc.contributor.author	Elser, Justin
dc.contributor.author	Boyd, Alexander E.
dc.contributor.author	Liston, Aaron
dc.contributor.author	Spatafora, Joseph W.
dc.contributor.author	Dharmwardhana, Palitha
dc.contributor.author	Raja, Rajani
dc.contributor.author	Sullivan, Christopher
dc.contributor.author	Romanel, Elisson
dc.contributor.author	Alves-Ferreira, Marcio
dc.contributor.author	Kulheim, Carsten
dc.contributor.author	Foley, William
dc.contributor.author	Carocha, Victor
dc.contributor.author	Paiva, Jorge
dc.contributor.author	Kudrna, David
dc.contributor.author	Brommonschenkel, Sergio H.
dc.contributor.author	Pasquali, Giancarlo
dc.contributor.author	Byrne, Margaret
dc.contributor.author	Rigault, Philippe
dc.contributor.author	Tibbits, Josquin
dc.contributor.author	Spokevicius, Antanas
dc.contributor.author	Jones, Rebecca C.
dc.contributor.author	Steane, Dorothy A.
dc.contributor.author	Vaillancourt, Rene E.
dc.contributor.author	Potts, Brad M.
dc.contributor.author	Joubert, Fourie
dc.contributor.author	Barry, Kerrie
dc.contributor.author	Pappas Jr, Georgios J.
dc.contributor.author	Strauss, Steven H.
dc.contributor.author	Jaiswal, Pankaj
dc.contributor.author	Grima-Pettenati, Jacqueline
dc.contributor.author	Salse, Jerome
dc.contributor.author	Van de Peer, Yves
dc.contributor.author	Rokhsar, Daniel S.
dc.contributor.author	Schmutz, Jeremy
dc.date.accessioned	2014-09-29T11:21:24Z
dc.date.available	2014-09-29T11:21:24Z
dc.date.issued	2014-06-19
dc.description.abstract	Eucalypts are the world’smost widely planted hardwood trees. Their outstanding diversity, adaptability and growth have made them a global renewable resource of fibre and energy. We sequenced and assembled .94% of the 640-megabase genome of Eucalyptus grandis. Of 36,376 predicted protein-coding genes, 34% occur in tandem duplications, the largest proportion thus far in plant genomes. Eucalyptus also shows the highestdiversity of genes for specializedmetabolites such as terpenes that act as chemical defence and provide unique pharmaceutical oils. Genome sequencing of the E. grandis sister species E. globulus and a set of inbred E. grandis tree genomes reveals dynamic genome evolution and hotspots of inbreeding depression. The E. grandis genome is the first reference for the eudicot orderMyrtales and is placed here sister to the eurosids. This resource expands our understanding of the unique biology of large woody perennials and provides a powerful tool to accelerate comparative biology, breeding and biotechnology.	en_US
dc.description.librarian	am2014	en_US
dc.description.sponsorship	The Brazilian Ministry of Science, Technology and Innovation (MCTI) through its research funding agencies (CNPq and FINEP), the Brazilian Federal District Research Foundation (FAP-DF), the public-private Genolyptus network of Brazilian forestry companies, the Tree Biosafety and Genomics Research Cooperative (TBGRC, Oregon State University), South African forestry companies Sappi and Mondi, the Technology and Human Resources for Industry Programme (THRIP, UID 80118), the South African Department of Science and Technology (DST) and National Research Foundation (NRF, UID 18312 and 86936), the Laboratoire d’Excellence (LABEX TULIP ANR-10-LABX-41), the Agence Nationale pour la Recherche (Project Tree For Joules ANR-2010-KBBE-007-01; Fundaçao para a Ciencia e Tecnologia (FCT, P-KBBE/ AGR_GPL/0001/2010), the Centre National pour la Recherche Scientifique (CNRS), the University Paul Sabatier Toulouse III (UPS).	en_US
dc.description.uri	http://www.nature.com	en_US
dc.identifier.citation	Myburg, AA, Grattapaglia, D, Tuskan, GA, Hellsten, U, Hayes, RD, Grimwood, J, Jenkins, J, Lindquist, E, Tice, H, Bauer, D, Goodstein, DM, Dubchak, I, Poliakov, A, Mizrachi, E, Kullan, ARK, Hussey, SG, Pinard, D, Van der Merwe, K, Singh, P, Van Jaarsveld, I, Silva-Junior, OB, Togawa, RC, Pappas, MR, Faria, DA, Sansaloni, CP, Petroli, CD, Yang, X, Ranjan, P, Tschaplinski, TJ, YE, C-Y, Li, T, Sterck, L, Vanneste, K, Murat, F, Soler, M, Clemente, HS, Saidi, N, Cassan-Wang, H, Dunand, C, Hefer, CA, Bornberg-Bauer, E, Kersting, AR, Vining, K, Amarasinghe, V, Ranik, M, Naithani, S, Elser, J, Boyd, AE, Liston, A, Spatafora, JW, Dharmwardhana, P, Raja, R, Sullivan, C, Romanel, E, Alves-Ferreira, M, Kulheim, C, Foley, W, Carocha, V, Paiva, J, Kudrna, D, Brommonschenkel, SH, Pasquali, G, Byrne, M, Rigault, P, Tibbits, J, Spokevicius, A, Jones, RC, Steane, DA, Vaillancourt, RE, Potts, BM, Joubert, F, Barry, K, Pappas Jr, GJ, Strauss, SH, Jaiswal, P, Grima-Pettenati, J, Salse, J, Van de Peer, Y, Rokhsar, DS & Schmutz, J 2014, 'The genome of Eucalyptus grandis', Nature, vol. 510, pp. 356-362.	en_US
dc.identifier.issn	0028--0836 (print)
dc.identifier.issn	1476-4687 (online)
dc.identifier.other	10.1038/nature13308
dc.identifier.uri	http://hdl.handle.net/2263/42125
dc.language.iso	en	en_US
dc.publisher	Nature Publising Group	en_US
dc.rights	© 2014 Macmillan Publishers Limited. All rights reserved. This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported licence.	en_US
dc.subject	Eucalypts	en_US
dc.subject	Hardwood trees	en_US
dc.subject	Eucalyptus grandis	en_US
dc.subject	Diversity	en_US
dc.title	The genome of Eucalyptus grandis	en_US
dc.type	Article	en_US