The genome of Eucalyptus grandis

dc.contributor.authorMyburg, Alexander Andrew
dc.contributor.authorGrattapaglia, Dario
dc.contributor.authorTuskan, Gerald A.
dc.contributor.authorHellsten, Uffe
dc.contributor.authorHayes, Richard D.
dc.contributor.authorGrimwood, Jane
dc.contributor.authorJenkins, Jerry
dc.contributor.authorLindquist, Erika
dc.contributor.authorTice, Hope
dc.contributor.authorBauer, Diane
dc.contributor.authorGoodstein, David M.
dc.contributor.authorDubchak, Inna
dc.contributor.authorPoliakov, Alexandre
dc.contributor.authorMizrachi, Eshchar
dc.contributor.authorKullan, Anand Raj Kumar
dc.contributor.authorHussey, Steven Grant
dc.contributor.authorPinard, Desre
dc.contributor.authorVan der Merwe, Karen
dc.contributor.authorSingh, Pooja
dc.contributor.authorVan Jaarsveld, Ida
dc.contributor.authorSilva-Junior, Orzenil B.
dc.contributor.authorTogawa, Roberto C.
dc.contributor.authorPappas, Marilia R.
dc.contributor.authorFaria, Danielle A.
dc.contributor.authorSansaloni, Carolina P.
dc.contributor.authorPetroli, Cesar D.
dc.contributor.authorYang, Xiaohan
dc.contributor.authorRanjan, Priya
dc.contributor.authorTschaplinski, Timothy J.
dc.contributor.authorYe, Chu-Yu
dc.contributor.authorLi, Ting
dc.contributor.authorSterck, Lieven
dc.contributor.authorVanneste, Kevin
dc.contributor.authorMurat, Florent
dc.contributor.authorSoler, Marcal
dc.contributor.authorClemente, Helene San
dc.contributor.authorSaidi, Naijib
dc.contributor.authorCassan-Wang, Hua
dc.contributor.authorDunand, Christophe
dc.contributor.authorHefer, Charles Amadeus
dc.contributor.authorBornberg-Bauer, Erich
dc.contributor.authorKersting, Anna R.
dc.contributor.authorVining, Kelly
dc.contributor.authorAmarasinghe, Vindhya
dc.contributor.authorRanik, Martin
dc.contributor.authorNaithani, Sushma
dc.contributor.authorElser, Justin
dc.contributor.authorBoyd, Alexander E.
dc.contributor.authorListon, Aaron
dc.contributor.authorSpatafora, Joseph W.
dc.contributor.authorDharmwardhana, Palitha
dc.contributor.authorRaja, Rajani
dc.contributor.authorSullivan, Christopher
dc.contributor.authorRomanel, Elisson
dc.contributor.authorAlves-Ferreira, Marcio
dc.contributor.authorKulheim, Carsten
dc.contributor.authorFoley, William
dc.contributor.authorCarocha, Victor
dc.contributor.authorPaiva, Jorge
dc.contributor.authorKudrna, David
dc.contributor.authorBrommonschenkel, Sergio H.
dc.contributor.authorPasquali, Giancarlo
dc.contributor.authorByrne, Margaret
dc.contributor.authorRigault, Philippe
dc.contributor.authorTibbits, Josquin
dc.contributor.authorSpokevicius, Antanas
dc.contributor.authorJones, Rebecca C.
dc.contributor.authorSteane, Dorothy A.
dc.contributor.authorVaillancourt, Rene E.
dc.contributor.authorPotts, Brad M.
dc.contributor.authorJoubert, Fourie
dc.contributor.authorBarry, Kerrie
dc.contributor.authorPappas Jr, Georgios J.
dc.contributor.authorStrauss, Steven H.
dc.contributor.authorJaiswal, Pankaj
dc.contributor.authorGrima-Pettenati, Jacqueline
dc.contributor.authorSalse, Jerome
dc.contributor.authorVan de Peer, Yves
dc.contributor.authorRokhsar, Daniel S.
dc.contributor.authorSchmutz, Jeremy
dc.contributor.emailzander.myburg@up.ac.zaen_US
dc.date.accessioned2014-09-29T11:21:24Z
dc.date.available2014-09-29T11:21:24Z
dc.date.issued2014-06-19
dc.description.abstractEucalypts are the world’smost widely planted hardwood trees. Their outstanding diversity, adaptability and growth have made them a global renewable resource of fibre and energy. We sequenced and assembled .94% of the 640-megabase genome of Eucalyptus grandis. Of 36,376 predicted protein-coding genes, 34% occur in tandem duplications, the largest proportion thus far in plant genomes. Eucalyptus also shows the highestdiversity of genes for specializedmetabolites such as terpenes that act as chemical defence and provide unique pharmaceutical oils. Genome sequencing of the E. grandis sister species E. globulus and a set of inbred E. grandis tree genomes reveals dynamic genome evolution and hotspots of inbreeding depression. The E. grandis genome is the first reference for the eudicot orderMyrtales and is placed here sister to the eurosids. This resource expands our understanding of the unique biology of large woody perennials and provides a powerful tool to accelerate comparative biology, breeding and biotechnology.en_US
dc.description.librarianam2014en_US
dc.description.sponsorshipThe Brazilian Ministry of Science, Technology and Innovation (MCTI) through its research funding agencies (CNPq and FINEP), the Brazilian Federal District Research Foundation (FAP-DF), the public-private Genolyptus network of Brazilian forestry companies, the Tree Biosafety and Genomics Research Cooperative (TBGRC, Oregon State University), South African forestry companies Sappi and Mondi, the Technology and Human Resources for Industry Programme (THRIP, UID 80118), the South African Department of Science and Technology (DST) and National Research Foundation (NRF, UID 18312 and 86936), the Laboratoire d’Excellence (LABEX TULIP ANR-10-LABX-41), the Agence Nationale pour la Recherche (Project Tree For Joules ANR-2010-KBBE-007-01; Fundaçao para a Ciencia e Tecnologia (FCT, P-KBBE/ AGR_GPL/0001/2010), the Centre National pour la Recherche Scientifique (CNRS), the University Paul Sabatier Toulouse III (UPS).en_US
dc.description.urihttp://www.nature.comen_US
dc.identifier.citationMyburg, AA, Grattapaglia, D, Tuskan, GA, Hellsten, U, Hayes, RD, Grimwood, J, Jenkins, J, Lindquist, E, Tice, H, Bauer, D, Goodstein, DM, Dubchak, I, Poliakov, A, Mizrachi, E, Kullan, ARK, Hussey, SG, Pinard, D, Van der Merwe, K, Singh, P, Van Jaarsveld, I, Silva-Junior, OB, Togawa, RC, Pappas, MR, Faria, DA, Sansaloni, CP, Petroli, CD, Yang, X, Ranjan, P, Tschaplinski, TJ, YE, C-Y, Li, T, Sterck, L, Vanneste, K, Murat, F, Soler, M, Clemente, HS, Saidi, N, Cassan-Wang, H, Dunand, C, Hefer, CA, Bornberg-Bauer, E, Kersting, AR, Vining, K, Amarasinghe, V, Ranik, M, Naithani, S, Elser, J, Boyd, AE, Liston, A, Spatafora, JW, Dharmwardhana, P, Raja, R, Sullivan, C, Romanel, E, Alves-Ferreira, M, Kulheim, C, Foley, W, Carocha, V, Paiva, J, Kudrna, D, Brommonschenkel, SH, Pasquali, G, Byrne, M, Rigault, P, Tibbits, J, Spokevicius, A, Jones, RC, Steane, DA, Vaillancourt, RE, Potts, BM, Joubert, F, Barry, K, Pappas Jr, GJ, Strauss, SH, Jaiswal, P, Grima-Pettenati, J, Salse, J, Van de Peer, Y, Rokhsar, DS & Schmutz, J 2014, 'The genome of Eucalyptus grandis', Nature, vol. 510, pp. 356-362.en_US
dc.identifier.issn0028--0836 (print)
dc.identifier.issn1476-4687 (online)
dc.identifier.other10.1038/nature13308
dc.identifier.urihttp://hdl.handle.net/2263/42125
dc.language.isoenen_US
dc.publisherNature Publising Groupen_US
dc.rights© 2014 Macmillan Publishers Limited. All rights reserved. This work is licensed under a Creative Commons Attribution-NonCommercial-ShareAlike 3.0 Unported licence.en_US
dc.subjectEucalyptsen_US
dc.subjectHardwood treesen_US
dc.subjectEucalyptus grandisen_US
dc.subjectDiversityen_US
dc.titleThe genome of Eucalyptus grandisen_US
dc.typeArticleen_US

Files

Original bundle

Now showing 1 - 1 of 1
Thumbnail Image
Name:
Myburg_Genome_2014.pdf
Size:
7.91 MB
Format:
Adobe Portable Document Format
Description:
Article
Download

License bundle

Now showing 1 - 1 of 1
Thumbnail Image
Name:
license.txt
Size:
1.71 KB
Format:
Item-specific license agreed upon to submission
Description:
Download

Collections

Research Articles (Genetics)
Research Articles (University of Pretoria)
Simple item page