dc.contributor.author |
Zablocki, Olivier
|
|
dc.contributor.author |
Pietersen, Gerhard
|
|
dc.date.accessioned |
2014-05-29T07:14:47Z |
|
dc.date.available |
2014-05-29T07:14:47Z |
|
dc.date.issued |
2014-08 |
|
dc.description.abstract |
Tristeza disease (caused by citrus tristeza virus, CTV) is currently controlled in South Africa by means of cross-protection. In this study, we characterized the CTV populations of three grapefruit mild strain 12 (GFMS12) single-aphid-transmission-derived sub-isolates at the whole-genome level using Illumina sequencing technology. A novel South African isolate (CT-ZA3, of the T68 genotype) was shown to be the dominant genotype in all GFMS12 sub-isolates tested, along with reads unique to various other genotypes occurring as minor components. Uncertainty remains as to the significance of these minor components. |
en_US |
dc.description.librarian |
hb2014 |
en_US |
dc.description.sponsorship |
Citrus Research International (CRI) |
en_US |
dc.description.uri |
http://link.springer.com/journal/705 |
en_US |
dc.identifier.citation |
Zablocki, O & Pietersen, G 2014, 'Characterization of a novel citrus tristeza virus genotype within three cross-protecting source GFMS12 sub-isolates in South Africa by means of Illumina sequencing', Archives of Virology, vol. 159, no. 8, pp. 2133-2139. |
en_US |
dc.identifier.issn |
0304-8608 (print) |
|
dc.identifier.issn |
1432-8798 (online) |
|
dc.identifier.other |
10.1007/s00705-014-2041-3 |
|
dc.identifier.uri |
http://hdl.handle.net/2263/39914 |
|
dc.language.iso |
en |
en_US |
dc.publisher |
Springer |
en_US |
dc.rights |
© Springer-Verlag Wien 2014. The original publication is available at : http://link.springer.com/journal/705. |
en_US |
dc.subject |
Triteza virus |
en_US |
dc.subject |
Next-generation sequencing |
en_US |
dc.subject |
Grapefruit mild strain 12 (GFMS12) |
en_US |
dc.title |
Characterization of a novel citrus tristeza virus genotype within three cross-protecting source GFMS12 sub-isolates in South Africa by means of Illumina sequencing |
en_US |
dc.type |
Postprint Article |
en_US |