Browsing Natural and Agricultural Sciences by UP Author "Coetzee, Martin Petrus Albertus"

Browsing Natural and Agricultural Sciences by UP Author "Coetzee, Martin Petrus Albertus"

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  • Fungal Planet description sheets : 281 – 319 
    Crous, Pedro W.; Wingfield, Michael J.; Schumacher, R.K.; Summerell, Brett A.; Giraldo, A.; Gené, J.; Guarro, J.; Wanasinghe, D.N.; Hyde, Kevin D.; Camporesi, E.; Gareth Jones, E.B.; Thambugala, K.M.; Malysheva, V.F.; Acharya, K.; Álvarez, J.; Alvarado, P.; Assefa, A.; Barnes, C.W.; Bartlett, J.S.; Blanchette, Robert A.; Burgess, Treena I.; Carlavilla, J.R.; Coetzee, Martin Petrus Albertus; Damm, Ulrike; Decock, C.A.; Den Breeÿen, A.; De Vries, Bert B.A.; Dutta, A.K.; Holdom, D.G.; Rooney-Latham, S.; Manjón, J.L.; Marincowitz, Seonju; Mirabofalthy, M.; Moreno, G.; Nakashima, C.; Papizadeh, M.; Shahzadeh Fazeli, S.A.; Amoozegar, M.A.; Romberg, M.K.; Shivas, R.G.; Stalpers, Joost A.; Stielow, Benjamin; Stukely, Michael J.C.; Swart, W.J.; Tan, Y.P.; Van der Bank, Michelle; Wood, A.R.; Zhang, Yong; Groenewald, Johannes Zacharias (Nationaal Herbarium Nederland and Centraalbureau voor Schimmelcultures, 2014)
    Novel species of fungi described in the present study include the following from South Africa: Alanphillipsia aloeicola from Aloe sp., Arxiella dolichandrae from Dolichandra unguiscati, Ganoderma austroafricanum from Jacaranda ...
  • Ganoderma species, including new taxa associated with root rot of the iconic Jacaranda mimosifolia in Pretoria, South Africa 
    Coetzee, Martin Petrus Albertus; Marincowitz, Seonju; Muthelo, Vuledzani Gloria; Wingfield, Michael J. (International Mycological Association, 2015-06-22)
    Jacaranda mimosifolia trees have been progressively dying due to Ganoderma root and butt rot disease in Pretoria (the “City of Jacarandas”) for many years. Ganoderma austroafricanum was described from these trees previously ...
  • Genome-based characterization of biological processes that differentiate closely related bacteria 
    Palmer, Marike; Steenkamp, Emma Theodora; Coetzee, Martin Petrus Albertus; Blom, Jochen; Venter, S.N. (Stephanus Nicolaas) (Frontiers Media, 2018-02-06)
    Bacteriologists have strived toward attaining a natural classification system based on evolutionary relationships for nearly 100 years. In the early twentieth century it was accepted that a phylogeny-based system would ...
  • Genome-informed Bradyrhizobium taxonomy : where to from here? 
    Avontuur, Juanita R.; Palmer, Marike; Beukes, Chrizelle Winsie; Chan, Wai Yin; Coetzee, Martin Petrus Albertus; Blom, Jochen; Stępkowski, Tomasz; Kyrpides, Nikos C.; Woyke, Tanja; Shapiro, Nicole; Whitman, William B.; Venter, S.N. (Stephanus Nicolaas); Steenkamp, Emma Theodora (Elsevier, 2019-07)
    Bradyrhizobium is thought to be the largest and most diverse rhizobial genus, but this is not reflected in the number of described species. Although it was one of the first rhizobial genera recognised, its taxonomy remains ...
  • Huntiella decorticans sp nov (Ceratocystidaceae) associated with dying Nothofagus in Patagonia 
    De Errasti, A.; De Beer, Z. Wilhelm; Rajchenberg, M.; Coetzee, Martin Petrus Albertus; Wingfield, Michael J.; Roux, Jolanda (Mycological Society of America, 2015)
    During a survey of ophiostomatoid fungi in native forests of southern Argentina, several isolates of Huntiella species were obtained from Nothofagus trees. Sequences of multiple gene regions were used to identify these ...
  • Identification of Armillaria species on declined oak in Britain : implications for oak health 
    Denman, Sandra; Barrett, Glyn; Kirk, Susan A.; McDonald, James E.; Coetzee, Martin Petrus Albertus (Oxford University Press, 2017-01)
    The identity of 51 isolates of Armillaria from 15 Quercus robur trees in poor health, and a single healthy tree, at nine sites in England, was determined using multilocus sequence analysis (MLSA) of three gene regions. ...
  • IMA Genome-F 11 : draft genome sequences of Fusarium xylarioides, Teratosphaeria gauchensis and T. zuluensis and genome annotation for Ceratocystis fimbriata 
    Wingfield, Brenda D.; Fourie, Arista; Simpson, Melissa Claire; Bushula-Njah, Vuyiswa; Aylward, Janneke; Barnes, Irene; Coetzee, Martin Petrus Albertus; Dreyer, Leanne Laurette; Duong, Tuan A.; Geiser, David M.; Roets, Francois; Steenkamp, Emma Theodora; Van der Nest, Magrieta Aletta; Van Heerden, Carel J.; Wingfield, Michael J. (International Mycological Association, 2019)
    Draft genomes of the fungal species Fusarium xylarioides, Teratosphaeria gauchensis and T. zuluensis are presented. In addition an annotation of the genome of Ceratocystis fimbriata is presented. Overall these genomes ...
  • IMA genome‑F17 : draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina 
    Wingfield, Brenda D.; Berger, David Kenneth; Coetzee, Martin Petrus Albertus; Duong, Tuan A.; Martin, Anke; Pham, Nam Q.; Van den Berg, Noelani; Wilken, Pieter Markus; Arun‑Chinnappa, Kiruba Shankari; Barnes, Irene; Buthelezi, Sikelela; Dahanayaka, Buddhika Amarasinghe; Duran, Alvaro; Engelbrecht, Juanita; Feurtey, Alice; Fourie, Arista; Fourie, Gerda; Hartley, Jesse Marion Holland; Kabwe, Eugene N. K.; Maphosa, Mkhululi N.; Mensah, Deborah L. Narh; Nsibo, David L.; Potgieter, Lizel; Poudel, Barsha; Stukenbrock, Eva H.; Thomas, Chanel; Vaghefi, Niloofar; Welgemoed, Tanya; Wingfield, Michael J. (International Mycological Association, 2022-11-21)
    No abstract available.
  • Metabolomic and molecular signatures of Mascarene Aloes using a multidisciplinary approach 
    Govinden-Soulange, J.; Lobine, D.; Frederich, M.; Kodja, H.; Coetzee, Martin Petrus Albertus; Ranghoo-Sanmukhiya, V.M. (Elsevier, 2017-01)
    In this research a multidisciplinary approach was used to unveil the genetic, metabolic uniqueness and relationships of endemic Mascarene Aloes (Aloe macra, Aloe purpurea, Aloe tormentorii) with respect to Aloe vera. ...
  • Mixta gen. nov., a new genus in the Erwiniaceae 
    Palmer, Marike; Steenkamp, Emma Theodora; Coetzee, Martin Petrus Albertus; Avontuur, Juanita R.; Chan, Wai Yin; Van Zyl, Elritha; Blom, Jochen; Venter, S.N. (Stephanus Nicolaas) (Microbiology Society, 2018-04)
    The Erwiniaceae contain many species of agricultural and clinical importance. Although relationships among most of the genera in this family are relatively well resolved, the phylogenetic placement of several taxa remains ...
  • Nonribosomal peptide synthetase gene clusters and characteristics of predicted NRPS-dependent siderophore synthetases in Armillaria and other species in the Physalacriaceae 
    Narh Mensah, Deborah Louisa; Wingfield, Brenda D.; Coetzee, Martin Petrus Albertus (Springer, 2023-02)
    Please read abstract in the article.
  • Nursery-linked plantation outbreaks and evidence for multiple introductions of the pitch canker pathogen Fusarium circinatum into South Africa 
    Santana, Quentin C.; Coetzee, Martin Petrus Albertus; Wingfield, Brenda D.; Wingfield, Michael J.; Steenkamp, Emma Theodora (Wiley, 2016-04)
    In recent years, Pinus plantation forestry has been significantly hampered by outbreaks of pitch canker caused by the fungus Fusarium circinatum. In this study we investigated the role of Pinus host, geographic origin ...
  • Paleogene radiation of a plant pathogenic mushroom 
    Coetzee, Martin Petrus Albertus; Bloomer, Paulette; Wingfield, Michael J.; Wingfield, Brenda D.; Carter, Dee A. (Public Library of Science, 2011-12-28)
    BACKGROUND: The global movement and speciation of fungal plant pathogens is important, especially because of the economic losses they cause and the ease with which they are able to spread across large areas. Understanding ...
  • Phylogenetic relationships among biological species of Armillaria from China 
    Coetzee, Martin Petrus Albertus; Wingfield, Brenda D.; Zhao, Jun; Van Coller, Sophia Johanna; Wingfield, Michael J. (Elsevier, 2015-09)
    Fourteen Chinese Biological Species (CBS) of Armillaria were previously identified in a collection of Chinese isolates. CBS C, F, G, H, J, L, N and O remained unnamed, while the remaining isolates included A. borealis, A. ...
  • Phylogenetic relationships among species of Ganoderma (Ganodermataceae, Basigiomycota) from Cameroon 
    Kinge, T.R.; Mih, A.M.; Coetzee, Martin Petrus Albertus (CSIRO, 2012)
    Ganoderma is an important genus of the Polyporales in the tropics. Identification of tropical species has mainly been based on morphology, which has led to misidentification. This study aimed to elucidate the diversity ...
  • Phylogenomic resolution of the bacterial genus Pantoea and its relationship with Erwinia and Tatumella 
    Palmer, Marike; Steenkamp, Emma Theodora; Coetzee, Martin Petrus Albertus; Chan, Wai Yin; Van Zyl, Elritha; De Maayer, Pieter; Coutinho, Teresa A.; Blom, Jochen; Smits, Theo H.M.; Duffy, Brion; Venter, S.N. (Stephanus Nicolaas) (Springer, 2017-10)
    Investigation of the evolutionary relationships between related bacterial species and genera with a variety of lifestyles have gained popularity in recent years. For analysing the evolution of specific traits, however, a ...
  • A practical approach to genome assembly and annotation of basidiomycota using the example of Armillaria 
    Mensah, Deborah L. Narh; Wingfield, Brenda D.; Coetzee, Martin Petrus Albertus (Future Science Group, 2023-09-08)
    Technological advancements in genome sequencing, assembly and annotation platforms and algorithms that resulted in several genomic studies have created an opportunity to further our understanding of the biology of ...
  • Prokaryotic species are sui generis evolutionary units 
    Palmer, Marike; Venter, S.N. (Stephanus Nicolaas); Coetzee, Martin Petrus Albertus; Steenkamp, Emma Theodora (Elsevier, 2019-03)
    Many gene flow barriers associated with genetic isolation during eukaryotic species divergence, are lacking in prokaryotes. In these organisms the processes associated with horizontal gene transfer (HGT) may provide both ...
  • Ras2 is important for growth and pathogenicity in Fusarium circinatum 
    Phasha, Mmatshepho Malekgale; Wingfield, Michael J.; Wingfield, Brenda D.; Coetzee, Martin Petrus Albertus; Hallen-Adams, H.; Fru, Felix Fon; Swalarsk-Parry, Benedicta S.; Yilmaz, Neriman; Duong, Tuan A.; Steenkamp, Emma Theodora (Elsevier, 2021-05)
    In this study, we investigated to possible role of Ras2 in Fusarium circinatum- a fungus that causes pine pitch canker disease on many different pine species and has a wide geographic distribution. This protein is encoded ...
  • Saprophytic and pathogenic fungi in the Ceratocystidaceae differ in their ability to metabolize plant-derived sucrose 
    Van der Nest, Magrieta Aletta; Steenkamp, Emma Theodora; McTaggart, Alistair R.; Trollip, Conrad; Godlonton, T.; Sauerman, E.; Roodt, Danielle; Naidoo, Kershney; Coetzee, Martin Petrus Albertus; Wilken, Pieter Markus; Wingfield, Michael J.; Wingfield, Brenda D. (BioMed Central, 2015-12-07)
    BACKGROUND : Proteins in the Glycoside Hydrolase family 32 (GH32) are carbohydrate-active enzymes known as invertases that hydrolyse the glycosidic bonds of complex saccharides. Fungi rely on these enzymes to gain access ...