Browsing Research Articles (Bioinformatics & Computational Biology Unit) by UP Author "Reva, Oleg N."

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Comparative genomics of Listeria species recovered from meat and food processing facilities

Mafuna, T.; Matle, I.; Magwedere, K.; Pierneef, Rian Ewald; Reva, Oleg N. (American Society for Microbiology, 2022-09-06)

Listeria species (spp.) are contaminants that can survive in food, on equipment, and on food processing premises if appropriate hygiene measures are not used. Homologous stress tolerance genes, virulence gene clusters such ...
The SeqWord Genome Browser : an online tool for the identification and visualization of atypical regions of bacterial genomes through oligonucleotide usage

Ganesan, Hamilton; Rakitianskaia, A.S. (Anastassia Sergeevna); Davenport, Colin F.; Tummler, Burkhard; Reva, Oleg N. (BioMed Central, 2008-08)

BACKGROUND: Data mining in large DNA sequences is a major challenge in microbial genomics and bioinformatics. Oligonucleotide usage (OU) patterns provide a wealth of information for large scale sequence analysis and ...

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