Browsing Research Articles (Genetics) by Title

Browsing Research Articles (Genetics) by Title

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  • First report of a potyvirus infecting Albuca rautanenii in the Namib Desert 
    Zablocki, Olivier; Rybicki, E.P.; Cowan, Don A. (American Phytopathological Society, 2014-12)
    Chlorotic, streak-like symptoms were observed in April 2013 on a single specimen of Albuca rautanenii (Schinz) J.C.Manning & Goldblatt (Family: Hyacinthaceae) found among other plants near Homeb in the Namib Desert, ...
  • Flagella by numbers: comparative genomic analysis of the supernumerary flagellar systems among the Enterobacterales 
    De Maayer, Pieter; Pillay, Talia; Coutinho, Teresa A. (BioMed Central, 2020)
    BACKGROUND: Flagellar motility is an efficient means of movement that allows bacteria to successfully colonize and compete with other microorganisms within their respective environments. The production and functioning ...
  • Flashy flagella : flagellin modification is relatively common and highly versatile among the Enterobacteriaceae 
    De Maayer, Pieter; Cowan, Don A. (BioMed Central, 2016-05-20)
    BACKGROUND : Post-translational glycosylation of the flagellin protein is relatively common among Gram-negative bacteria, and has been linked to several phenotypes, including flagellar biosynthesis and motility, biofilm ...
  • Flooding and Phytophthora cinnamomi : effects on photosynthesis and chlorophyll fluorescence in shoots of non-grafted Persea americana (Mill.) rootstocks differing in tolerance to Phytophthora root rot 
    Reeksting, Bianca J.; Taylor, N.J. (Nicolette); Van den Berg, Noelani (Elsevier, 2014-11)
    Please read abstract in the article.
  • Foliar pathogens of eucalypts 
    Crous, Pedro W.; Wingfield, Michael J.; Cheewangkoon, R.; Carnegie, A.J.; Burgess, T.I.; Summerell, B.A.; Edwards, J.; Taylor, P.W.J.; Groenewald, Johannes Zacharias (Elsevier, 2019-09)
    Species of eucalypts are commonly cultivated for solid wood and pulp products. The expansion of commercially managed eucalypt plantations has chiefly been driven by their rapid growth and suitability for propagation across ...
  • Foliar terpenoid levels and corresponding gene expression are systemically and differentially induced in Eucalyptus grandis clonal genotypes in response to Chrysoporthe austroafricana challenge 
    Visser, Erik A.; Mangwanda, Ronishree; Becker, John V.W.; Külheim, C.; Foley, William; Myburg, Alexander Andrew; Naidoo, Sanushka (Wiley, 2015-12)
    Induction of systemic defences to fungal pathogens is well described in model plant systems, but not extensively studied in large woody perennials. Systemic induced defences in long-lived tree species, such as Eucalyptus ...
  • Formation of the Asian Rabies Control Network (ARACON) : a common approach towards a global good 
    Coetzer, Andre; Scott, Terence Peter; Amparo, Anna Charinna; Jayme, Sarah; Nel, Louis Hendrik (Elsevier, 2018-09)
    The drive towards the worldwide elimination of dog-mediated human rabies by 2030 is the first step towards the ultimate goal of dog rabies elimination – as dogs account for more than 99% of human rabies cases globally – ...
  • Four new host and three new state records of Dothistroma needle blight caused by Dothistroma pini in the United States 
    Barnes, Irene; Walla, J.A.; Bergdahl, A.; Wingfield, Michael J. (American Phytopathological Society, 2014-10)
    No abstract available
  • Friends and family : a software program for identification of unrelated individuals from molecular marker data 
    De Jager, G.J. (Deon); Swarts, Petrus; Harper, Cindy Kim; Bloomer, Paulette (Wiley, 2017-11)
    The identification of related and unrelated individuals from molecular marker data is often difficult, particularly when no pedigree information is available and the data set is large. High levels of relatedness or inbreeding ...
  • From recognition to action : a strategic approach to foster sustainable collaborations for rabies elimination 
    Octaria, Rany; Salyer, Stephanie J.; Blanton, Jesse; Pieracci, Emily G.; Munyua, Peninah; Millien, Max; Nel, Louis Hendrik; Wallace, Ryan M. (Public Library of Science, 2018-10-25)
    The World Health Organization (WHO), World Organisation for Animal Health (OIE), Food and Agricultural Organization of the United Nations (FAO), and Global Alliance for Rabies Control (GARC) have established a global ...
  • Function, dynamics and evolution of network motif modules in integrated gene regulatory networks of worm and plant 
    Defoort, Jonas; Van de Peer, Yves; Vermeirssen, Vanessa (Oxford University Press, 2018-06-05)
    Gene regulatory networks (GRNs) consist of different molecular interactions that closely work together to establish proper gene expression in time and space. Especially in higher eukaryotes, many questions remain on ...
  • Functional and evolutionary genomic inferences in Populus through genome and population sequencing of American and European aspen 
    Lin, Yao-Cheng; Wang, Jing; Delhomme, Nicolas; Schiffthaler, Bastian; Sundstrom, Gorel; Zuccolo, Andrea; Nystedt, Bjorn; Hvidsten, Torgeir R.; De la Torre, Amanda; Cossu, Rosa M.; Hoeppner, Marc P.; Lantz, Henrik; Scofield, Douglas G.; Zamani, Neda; Johansson, Anna; Mannapperuma, Chanaka; Robinson, Kathryn M.; Mahler, Niklas; Leitch, Ilia J.; Pellicer, Jaume; Park, Eung-Jun; Van Montagu, Marc; Van de Peer, Yves; Grabherr, Manfred; Jansson, Stefan; Ingvarsson, Par K.; Street, Nathaniel R. (National Academy of Sciences, 2018-10-29)
    The Populus genus is one of the major plant model systems, but genomic resources have thus far primarily been available for poplar species, and primarily Populus trichocarpa (Torr. & Gray), which was the first tree with ...
  • Functional annotation of putative QTL associated with black tea quality and drought tolerance traits 
    Koech, Robert K.; Malebe, Pelly Masixolise; Nyarukowa, Christopher; Mose, Richard; Kamunya, Samson M.; Joubert, Fourie; Apostolides, Zeno (Nature Research, 2019-02)
    The understanding of black tea quality and percent relative water content (%RWC) traits in tea (Camellia sinensis) by a quantitative trait loci (QTL) approach can be useful in elucidation and identification of candidate ...
  • Functional characterization of a global virulence regulator Hfq and identification of Hfq-dependent sRNAs in the plant pathogen Pantoea ananatis 
    Shin, Giyoon; Schachterle, Jeffrey K.; Jeffrey K. Schachterle; Moleleki, Lucy Novungayo; Coutinho, Teresa A.; Sundin, George W. (Frontiers Media, 2019-09-11)
    To successfully infect plant hosts, the collective regulation of virulence factors in a bacterial pathogen is crucial. Hfq is an RNA chaperone protein that facilitates the small RNA (sRNA) regulation of global gene ...
  • Functional mechanisms underlying pleiotropic risk alleles at the 19p13.1 breast-ovarian cancer susceptibility locus 
    Lawrenson, Kate; Kar, Siddhartha; McCue, Karen; Kuchenbaeker, Karoline; Michailidou, Kyriaki; Tyrer, Jonathan; Beesley, Jonathan; Ramus, Susan J.; Li, Qiyuan; Delgado, Melissa K.; Lee, Janet M.; Aittomaki, Kristiina; Andrulis, Irene L.; Anton-Culver, Hoda; Arndt, Volker; Arun, Banu K.; Arver, Brita; Bandera, Elisa V.; Barile, Monica; Barkardottir, Rosa B.; Barrowdale, Daniel; Beckmann, Matthias W.; Benitez, Javier; Berchuck, Andrew; Bisogna, Maria; Bjorge, Line; Blomqvist, Carl; Blot, William; Bogdanova, Natalia; Bojesen, Anders; Bojesen, Stig E.; Bolla, Manjeet K.; Bonanni, Bernardo; Borresen-Dale, Anne-Lise; Brauch, Hiltrud; Brennan, Paul; Brenner, Hermann; Bruinsma, Fiona; Brunet, Joan; Buhari, Shaik Ahmad; Burwinkel, Barbara; Butzow, Ralf; Buys, Saundra S.; Cai, Qiuyin; Caldes, Trinidad; Canniotto, Rikki; Chang-Claude, Jenny; Chiquette, Jocelyne; Choi, Ji-Yeob; Claes, Kathleen B.M.; GEMO Study Collaborators; Campbell, Ian; Cook, Linda S.; Cox, Angela; Cramer, Daniel W.; Cross, Simon S.; Cybulski, Cezary; Czene, Kamila; Daly, Mary B.; Damiola, Francesca; Dansonka-Mieszkowskaÿÿ, Agnieszka; Darabi, Hatef; Dennis, Joe; Devilee, Peter; Diez, Orland; Doherty, Jennifer A.; Domchek, Susan M.; Dorfling, Cecilia Maria; Dork, Thilo; Dumont, Martine; Ehrencrona, Hans; Ejlertsen, Bent; Ellis, Steve; EMBRACE; Engel, Christoph; Lee, Eunjung; Evans, D. Gareth; Fasching, Peter A.; Feliubadalo, Lidia; Figueroa, Jonine; Flesch-Janys, Dieter; Fletcher, Olivia; Flyger, Henrik; Foretova, Lenka; Fostira, Florentia; Foulkes, William D.; Fridley, Brooke L.; Friedman, Eitan; Frost, Debra; Gambino, Gaetana; Garber, Judy; Garcıa-Closas, Montserrat; Gentry-Maharaj, Aleksandra; Ghoussaini, Maya; Giles, Graham G.; Glasspool, Rosalind; Godwin, Andrew K.; Goldberg, Mark S.; Goldgar, David E.; Gonzalez-Neira, Anna; Goode, Ellen L.; Goodman, Marc T.; Greene, Mark H.; Gronwald, Jacek; Guenel, Pascal; Haiman, Christopher A.; Hall, Per; Hallberg, Emily; Hamann, Ute; Hansen, Thomas V.O.; Harrington, Patricia A.; Hartman, Mikael; Hassan, Norhashimah; Healey, Sue; The Hereditary Breast and Ovarian Cancer Research Group Netherlands (HEBON); Heitz, Florian; Herzog, Josef; Hogdall, Estrid; Hogdall, Claus K.; Hogervorst, Frans B.L.; Hollestelle, Antoinette; Hopper, John L.; Hulick, Peter J.; Huzarski, Tomasz; Imyanitov, Evgeny N.; KConFab Investigators; Australian Ovarian Cancer Study Group; Isaacs, Claudine; Ito, Hidemi; Jakubowska, Anna; Janavicius, Ramunas; Jensen, Allan; John, Esther M.; Johnson, Nichola; Kabisch, Maria; Kang, Daehee; Kapuscinski, Miroslav; Karlan, Beth Y.; Khan, Sofia; Kiemeney, Lambertus A.; Kjaer, Susanne Kruger; Knight, Julia A.; Konstantopoulou, Irene; Kosma, Veli-Matti; Kristensen, Vessela; Kupryjanczyk, Jolanta; Kwong, Ava; De la Hoya, Miguel; Laitman, Yael; Lambrechts, Diether; Le, Nhu; De Leeneer, Kim; Lester, Jenny; Levine, Douglas A.; Li, Jingmei; Lindblom, Annika; Long, Jirong; Lophatananon, Artitaya; Loud, Jennifer T.; Lu, Karen; Lubinski, Jan; Mannermaa, Arto; Manoukian, Siranoush; Le Marchand, Loic; Margolin, Sara; Marme, Frederik; Massuger, Leon F.A.G.; Matsuo, Keitaro; Mazoyer, Sylvie; McGuffog, Lesley; McLean, Catriona; McNeish, Iain; Meindl, Alfons; Menon, Usha; Mensenkamp, Arjen R.; Milne, Roger L.; Montagna, Marco; Moysich, Kirsten B.; Muir, Kenneth; Mulligan, Anna Marie; Nathanson, Katherine L.; Ness, Roberta B.; Neuhausen, Susan L.; Nevanlinna, Heli; Nord, Silje; Nussbaum, Robert L.; Odunsi, Kunle; Offit, Kenneth; Olopade, Olufunmilayo I.; Olson, Janet E.; Olswold, Curtis; O’Malley, David; Orlow, Irene; Orr, Nick; Osorio, Ana; Park, Sue Kyung; Pearce, Celeste L.; Pejovic, Tanja; Peterlongo, Paolo; Pfeiler, Georg; Phelan, Catherine M.; Poole, Elizabeth M.; Pylkas, Katri; Radice, Paolo; Rantala, Johanna; Rashid, Muhammad Usman; Rennert, Gad; Rhenius, Valerie; Rhiem, Kerstin; Risch, Harvey A.; Rodriguez, Guz; Rossing, Mary Anne; Rudolph, Anja; Salvesen, Helga B.; Sangrajrang, Suleeporn; Sawyer, Elinor J.; Schildkraut, Joellen M.; Schmidt, Marjanka K.; Schmutzler, Rita K.; Sellers, Thomas A.; Seynaeve, Caroline; Shah, Mitul; Shen, Chen-Yang; Shu, Xiao-Ou; Sieh, Weiva; Singer, Christian F.; Sinilnikova, Olga M.; Slager, Susan; Song, Honglin; Soucy, Penny; Southey, Melissa C.; Stenmark-Askmalm, Marie; Stoppa-Lyonnet, Dominique; Teo, Soo H.; Terry, Kathryn L.; Terry, Mary Beth; Thomassen, Mads; Tibiletti, Maria Grazia; Tihomirova, Laima; Tognazzo, Silvia; Toland, Amanda Ewart; Tomlinson, Ian; Torres, Diana; Truong, Therese; Tseng, Chiu-chen; Tung, Nadine; Tworoger, Shelley S.; Vachon, Celine; Van den Ouweland, Ans M.W.; Van Doorn, Helena C.; Jansen van Rensburg, Elizabeth; Van’t Veer, Laura J.; Vanderstichele, Adriaan; Vergote, Ignace; Vijai, Joseph; Wang, Qin; Wang-Gohrke, Shan; Weitzel, Jeffrey N.; Wentzensen, Nicolas; Whittemore, Alice S.; Wildiers, Hans; Winqvist, Robert; Wu, Anna H.; Yannoukakos, Drakoulis; Yoon, Sook-Yee; Yu, Jyh-Cherng; Zheng, Wei; Zheng, Ying; Khanna, Kum Kum; Simard, Jacques; Monteiro, Alvaro N.; French, Juliet D.; Couch, Fergus J.; Freedman, Matthew L.; Easton, Douglas F.; Dunning, Alison M.; Pharoah, Paul D.; Edwards, Stacey L.; Chenevix-Trench, Georgia; Antoniou, Antonis C.; Gayther, Simon A. (Nature Publishing Group, 2016-09-07)
    A locus at 19p13 is associated with breast cancer (BC) and ovarian cancer (OC) risk. Here we analyse 438 SNPs in this region in 46,451 BC and 15,438 OC cases, 15,252 BRCA1 mutation carriers and 73,444 controls and identify ...
  • Functional network analysis of genes differentially expressed during xylogenesis in soc1ful woody Arabidopsis plants 
    Davin, Nicolas; Edger, Patrick P.; Hefer, Charles A.; Mizrachi, Eshchar; Schuetz, Mathias; Smets, Erik; Myburg, Alexander Andrew; Douglas, Carl J.; Schranz, Michael E.; Lens, Frederic (Wiley Open Access, 2016-03)
    Many plant genes are known to be involved in the development of cambium and wood, but how the expression and functional interaction of these genes determine the unique biology of wood remains largely unknown. We used the ...
  • The functional potential of the rhizospheric microbiome of an invasive tree species, Acacia dealbata 
    Kamutando, Casper N.; Vikram, Surendra; Makhalanyane, Thulani Peter; Greve, Michelle; Le Roux, Johannes J.; Richardson, David M.; Cowan, Don A.; Valverde, Angel (Springer, 2019-01)
    Plant-microbe interactions mediate both the invasiveness of introduced plant species and the impacts that they have in invaded ecosystems. Although the phylogenetic composition of the rhizospheric microbiome of Acacia ...
  • Fungal associates of an invasive pine-infesting bark beetle, Dendroctonus valens, including seven new Ophiostomatalean fungi 
    Marincowitz, Seonju; Duong, Tuan A.; Taerum, Stephen J.; De Beer, Z. Wilhelm; Wingfield, Michael J. (Naturalis Biodiversity Center and Centraalbureau voor Schimmelcultures, 2020-07-22)
    The red turpentine beetle (RTB; Dendroctonus valens) is a bark beetle that is native to Central and North America. This insect is well-known to live in association with a large number of Ophiostomatalean fungi. The beetle ...
  • Fungal clones win the battle, but recombination wins the war 
    André Drenth; McTaggart, Alistair R.; Wingfield, Brenda D. (International Mycological Association, 2019-10-29)
    Clonal reproduction is common in fungi and fungal-like organisms during epidemics and invasion events. The success of clonal fungi shaped systems for their classification and some pathogens are tacitly treated as asexual. We ...
  • Fungal genomes enhance our understanding of the pathogens affecting trees cultivated in Southern Hemisphere plantations 
    Coetzee, Martin Petrus Albertus; Santana, Quentin C.; Steenkamp, Emma Theodora; Wingfield, Brenda D.; Wingfield, Michael J. (NISC (Pty) Ltd and Informa UK Limited (trading as Taylor and Francis Group), 2020)
    Forest pathogens are a major cause of forest disturbances and they have a significant economic impact on commercial forestry. Genomics is an important technology now available for studies concerning tree health, enabling ...