Browsing Research Articles (Biochemistry) by Author "Ferrer, Manuel"

Browsing Research Articles (Biochemistry) by Author "Ferrer, Manuel"

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  • Biochemical diversity of carboxyl Esterases and Lipases from Lake Arreo (Spain) : a metagenomic approach 
    Martinez-Martinez, Monica; Alcaide, Maria; Tchigvintsev, Anatoli; Reva, Oleg N.; Polaina, Julio; Bargiela, Rafael; Guazzaroni, Maria-Eugenia; Chicote, Alvaro; Canet, Albert; Valero, Francisco; Eguizabal, Eugenio Rico; Guerrero, Maria del Carmen; Yakunin, Alexander F.; Ferrer, Manuel (American Society for Microbiology, 2013-06)
    The esterases and lipases from the / hydrolase superfamily exhibit an enormous sequence diversity, fold plasticity, and activities. Here, we present the comprehensive sequence and biochemical analyses of seven distinct ...
  • Diversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm species 
    Beloqui, Ana; Nechitaylo, Taras Y.; Lopez-Cortes, Nieves; Ghazi, Azam; Guazzaroni, Maria-Eugenia; Polaina, Julio; Strittmatter, Axel W.; Reva, Oleg N.; Waliczek, Agnes; Yakimov, Michail M.; Golyshina, Olga V.; Ferrer, Manuel; Golyshin, Peter N. (American Society for Microbiology, 2010-09)
    The guts and casts of earthworms contain microbial assemblages that process large amounts of organic polymeric substrates from plant litter and soil; however, the enzymatic potential of these microbial communities remains ...
  • Functional metagenomics unveils a multifunctional glycosyl hydrolase from the family 43 catalysing the breakdown of plant polymers in the calf rumen 
    Ferrer, Manuel; Ghazi, Azam; Beloqui, Ana; Vieites, Jose Marıa; Lopez-Cortes, Nieves; Marın-Navarro, Julia; Nechitaylo, Taras Y.; Guazzaroni, Marıa-Eugenia; Polaina, Julio; Waliczek, Agnes; Chernikova, Tatyana N.; Reva, Oleg N.; Golyshina, Olga V.; Golyshin, Peter N. (2012-06-25)
    Microbial communities from cow rumen are known for their ability to degrade diverse plant polymers at high rates. In this work, we identified 15 hydrolases through an activity-centred metagenome analysis of a fibre-adherent ...
  • Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica 
    Kube, Michael; Chernikova, Tatyana N.; Al-Ramahi, Yamal; Beloqui, Ana; Lopez-Cortes, Nieves; Guazzaroni, Marıa-Eugenia; Heipieper, Hermann J.; Klages, Sven; Kotsyurbenko, Oleg R.; Langer, Ines; Nechitaylo, Taras Y.; Lunsdorf, Heinrich; Fernandez, Marisol; Juarez, Silvia; Ciordia, Sergio; Singer, Alexander; Kagan, Olga; Egorova, Olga; Petit, Pierre Alain; Stogios, Peter; Kim, Youngchang; Tchigvintsev, Anatoli; Flick, Robert; Denaro, Renata; Genovese, Maria; Albar, Juan P.; Reva, Oleg N.; Martınez-Gomariz, Montserrat; Tran, Hai; Ferrer, Manuel; Savchenko, Alexei; Yakunin, Alexander F.; Yakimov, Michail M.; Golyshina, Olga V.; Reinhardt, Richard; Golyshin, Peter N. (Nature Publising Group, 2013-07-23)
    Ubiquitous bacteria from the genus Oleispira drive oil degradation in the largest environment on Earth, the cold and deep sea. Here we report the genome sequence of Oleispira antarctica and show that compared with ...
  • Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp rimicaris exoculata by using functional metagenomics 
    Alcaide, María; Tchigvintsev, Anatoli; Martinez-Martinez, Monica; Popovic, Ana; Reva, Oleg N.; Lafraya, Alvaro; Bargiela, Rafael; Nechitaylo, Taras Y.; Matesanz, Ruth; Cambon-Bonavita, Marie-Ann; Jebbar, Mohamed; Yakimov, Michail M.; Savchenko, Alexei; Golyshina, Olga V.; Yakunin, Alexander F.; Golyshin, Peter N.; Ferrer, Manuel; The MAMBA Consortium (American Society for Microbiology, 2015-03)
    The shrimp Rimicaris exoculata dominates the fauna in deep-sea hydrothermal vent sites along the Mid-Atlantic Ridge (depth, 2,320 m). Here, we identified and biochemically characterized three carboxyl esterases from ...
  • Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT 
    Golyshina, Olga V.; Tran, Hai; Reva, Oleg N.; Lemak, Sofia; Yakunin, Alexander F.; Goesmann, Alexander; Nechitaylo, Taras Y.; LaCono, Violetta; Smedile, Francesco; Slesarev, Alexei; Rojo, David; Barbas, Coral; Ferrer, Manuel; Yakimov, Michail M.; Golyshin, Peter N. (Nature Publishing Group, 2017-06-16)
    Ferroplasmaceae represent ubiquitous iron-oxidising extreme acidophiles with a number of unique physiological traits. In a genome-based study of Ferroplasma acidiphilum YT, the only species of the genus Ferroplasma with ...
  • Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats 
    Alcaide, María; Stogios', Peter J.; Lafraya, Álvaro; Tchigvintsev, Anatoli; Flick, Robert; Bargiela, Rafael; Chernikova, Tatyana N.; Reva, Oleg N.; Hai, Tran; Leggewie, Christian C.; Katzke, Nadine; La Cono, Violetta; Matesanz, Ruth; Jebbar, Mohamed; Jaeger, Karl-Erich; Yakimov, Michail M.; Yakunin, Alexander F.; Golyshin, Peter N.; Golyshina, Olga V.; Savchenko, Alexei; Ferrer, Manuel; The MAMBA Consortium (Wiley, 2015-02)
    The present study provides a deeper view of protein functionality as a function of temperature, salt and pressure in deep-sea habitats. A set of eight different enzymes from five distinct deep-sea (3040–4908 m depth), ...