Browsing Natural and Agricultural Sciences by Author "Yakimov, Michail M."

Browsing Natural and Agricultural Sciences by Author "Yakimov, Michail M."

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  • Diversity of glycosyl hydrolases from cellulose-depleting communities enriched from casts of two earthworm species 
    Beloqui, Ana; Nechitaylo, Taras Y.; Lopez-Cortes, Nieves; Ghazi, Azam; Guazzaroni, Maria-Eugenia; Polaina, Julio; Strittmatter, Axel W.; Reva, Oleg N.; Waliczek, Agnes; Yakimov, Michail M.; Golyshina, Olga V.; Ferrer, Manuel; Golyshin, Peter N. (American Society for Microbiology, 2010-09)
    The guts and casts of earthworms contain microbial assemblages that process large amounts of organic polymeric substrates from plant litter and soil; however, the enzymatic potential of these microbial communities remains ...
  • Functional diversity of nanohaloarchaea within xylan-degrading consortia 
    Reva, Oleg N.; Messina, Enzo; La Cono, Violetta; Crisafi, Francesca; Smedile, Francesco; La Spada, Gina; Marturano, Laura; Selivanova, Elena A.; Rohde, Manfred; Krupovic, Mart; Yakimov, Michail M. (Frontiers Media, 2023-05-31)
    Extremely halophilic representatives of the phylum Candidatus Nanohaloarchaeota (members of the DPANN superphyla) are obligately associated with extremely halophilic archaea of the phylum Halobacteriota (according to the ...
  • Genome sequence and functional genomic analysis of the oil-degrading bacterium Oleispira antarctica 
    Kube, Michael; Chernikova, Tatyana N.; Al-Ramahi, Yamal; Beloqui, Ana; Lopez-Cortes, Nieves; Guazzaroni, Marıa-Eugenia; Heipieper, Hermann J.; Klages, Sven; Kotsyurbenko, Oleg R.; Langer, Ines; Nechitaylo, Taras Y.; Lunsdorf, Heinrich; Fernandez, Marisol; Juarez, Silvia; Ciordia, Sergio; Singer, Alexander; Kagan, Olga; Egorova, Olga; Petit, Pierre Alain; Stogios, Peter; Kim, Youngchang; Tchigvintsev, Anatoli; Flick, Robert; Denaro, Renata; Genovese, Maria; Albar, Juan P.; Reva, Oleg N.; Martınez-Gomariz, Montserrat; Tran, Hai; Ferrer, Manuel; Savchenko, Alexei; Yakunin, Alexander F.; Yakimov, Michail M.; Golyshina, Olga V.; Reinhardt, Richard; Golyshin, Peter N. (Nature Publising Group, 2013-07-23)
    Ubiquitous bacteria from the genus Oleispira drive oil degradation in the largest environment on Earth, the cold and deep sea. Here we report the genome sequence of Oleispira antarctica and show that compared with ...
  • Identification and characterization of carboxyl esterases of gill chamber-associated microbiota in the deep-sea shrimp rimicaris exoculata by using functional metagenomics 
    Alcaide, María; Tchigvintsev, Anatoli; Martinez-Martinez, Monica; Popovic, Ana; Reva, Oleg N.; Lafraya, Alvaro; Bargiela, Rafael; Nechitaylo, Taras Y.; Matesanz, Ruth; Cambon-Bonavita, Marie-Ann; Jebbar, Mohamed; Yakimov, Michail M.; Savchenko, Alexei; Golyshina, Olga V.; Yakunin, Alexander F.; Golyshin, Peter N.; Ferrer, Manuel; The MAMBA Consortium (American Society for Microbiology, 2015-03)
    The shrimp Rimicaris exoculata dominates the fauna in deep-sea hydrothermal vent sites along the Mid-Atlantic Ridge (depth, 2,320 m). Here, we identified and biochemically characterized three carboxyl esterases from ...
  • Interplay of intracellular and trans-cellular DNA methylation in natural archaeal consortia 
    Reva, Oleg N.; La Cono, Violetta; Crisafi, Francesca; Smedile, Francesco; Mudaliyar, Manasi; Ghosal, Debnath; Giuliano, Laura; Krupovic, Mart; Yakimov, Michail M. (Wiley, 2024-04)
    DNA methylation serves a variety of functions across all life domains. In this study, we investigated archaeal methylomics within a tripartite xylanolytic halophilic consortium. This consortium includes Haloferax lucertense ...
  • Metabolic and evolutionary patterns in the extremely acidophilic archaeon Ferroplasma acidiphilum YT 
    Golyshina, Olga V.; Tran, Hai; Reva, Oleg N.; Lemak, Sofia; Yakunin, Alexander F.; Goesmann, Alexander; Nechitaylo, Taras Y.; LaCono, Violetta; Smedile, Francesco; Slesarev, Alexei; Rojo, David; Barbas, Coral; Ferrer, Manuel; Yakimov, Michail M.; Golyshin, Peter N. (Nature Publishing Group, 2017-06-16)
    Ferroplasmaceae represent ubiquitous iron-oxidising extreme acidophiles with a number of unique physiological traits. In a genome-based study of Ferroplasma acidiphilum YT, the only species of the genus Ferroplasma with ...
  • Pressure adaptation is linked to thermal adaptation in salt-saturated marine habitats 
    Alcaide, María; Stogios', Peter J.; Lafraya, Álvaro; Tchigvintsev, Anatoli; Flick, Robert; Bargiela, Rafael; Chernikova, Tatyana N.; Reva, Oleg N.; Hai, Tran; Leggewie, Christian C.; Katzke, Nadine; La Cono, Violetta; Matesanz, Ruth; Jebbar, Mohamed; Jaeger, Karl-Erich; Yakimov, Michail M.; Yakunin, Alexander F.; Golyshin, Peter N.; Golyshina, Olga V.; Savchenko, Alexei; Ferrer, Manuel; The MAMBA Consortium (Wiley, 2015-02)
    The present study provides a deeper view of protein functionality as a function of temperature, salt and pressure in deep-sea habitats. A set of eight different enzymes from five distinct deep-sea (3040–4908 m depth), ...