Korotetskiy, IlyaJumagaziyeva, ArdakKerimzhanova, BahkytzhanReva, Oleg N.Kuznetsova, Tatyana V.Shilov, SergeyIvanova, LudmilaZubenko, NatalyaParenova, RaikhanIskakbayeva, ZhanarBaimakhanov, BolatbekBekmuhamedova, Aimana2023-05-242023-05-242022-12Korotetskiy, I., Jumagaziyeva, A., Kerimzhanova, B. et al. 2022, 'Whole genome sequence data of Stenotrophomonas maltophilia SCAID WND1-2022 (370)', Data in Brief, vol. 45, art. 108694, pp. 1-9, doi : 10.1016/j.dib.2022.108694.2352-340910.1016/j.dib.2022.108694http://hdl.handle.net/2263/90801The whole genome sequence of a hospital infection agent, Stenotrophomonas maltophilia SCAID WND1-2022 (370), is reported. Raw PacBio generated reads and the genome sequence were deposited at NCBI under BioPro- ject PRJNA754843. The genome comprises two replicons: 4,880,425 bp long chromosome comprising 4524 proteins and functional RNA coding genes and 38,606 bp long plasmid containing 40 CDS. Both replicons were methylated at third cytosine residues of AC C TC motifs. The taxonomic provenance of SCAID WND1-2022 (370) was determined by calculating sequence similarity to the reference genomes at NCBI that showed the highest 97.35% identity to S. maltophilia ISMMS4. Many antibiotic resistance and virulence genes were identi- fied on the chromosome of S. maltophilia SCAID WND1-2022 (370), which include multiple efflux pumps, beta-lactamases, and genes involved in biofilm formation. The plasmid se- quence was dissimilar to any known plasmid and seemingly was acquired from a distant microorganism. Plasmid-born genes possibly contributed to the virulence of the pathogens, but not to its drug resistance.en© 2022 The Author(s). This is an open access article under the CCBY license.Hospital-associated pathogenSequencingMethylationAntimicrobial resistance (AMR)Multidrug-resistant (MDR)Article