Van Parys, ThomasMelckenbeeck, IneHoubraken, MaartenAudenaert, PieterColle, DidierPickavet, MarioDemeester, PietVan de Peer, Yves2017-05-022017-02Van Parys, T, Melckenbeeck, I, Houbraken, M, Audenaert, P, Colle, D, Pickavet, M, Demeester, P & Van de Peer, Y 2017, 'A Cytoscape app for motif enumeration with ISMAGS, Bioinformatics, vol. 33, no. 3, pp. 461-463.1367-4803 (print)1460-2059 (online)10.1093/bioinformatics/btw626http://hdl.handle.net/2263/60160SUMMARY : We present a Cytoscape app for the ISMAGS algorithm, which can enumerate all instances of a motif in a graph, making optimal use of the motif’s symmetries to make the search more efficient. The Cytoscape app provides a handy interface for this algorithm,which allows more efficient network analysis. AVAILABILITY AND IMPLEMENTATION : The Cytoscape app for ISMAGS can be freely downloaded from the Cytoscape App store http://apps.cytoscape.org/apps/ismags. Source code and documentation for ISMAGS are available at https://github.com/biointec/ismags. Source code and documentation for the Cytoscape app are available at https://gitlab.psb.ugent.be/thpar/ISMAGS_Cytoscape.en© The Authors 2016. Published by Oxford University Press. This is a pre-copy-editing, author-produced PDF of an article accepted for publication in Bioinformatics following peer review. The definitive publisher-authenticated version is : Title, Bioinformatics, vol. 33, no. 3, pp. 461-463, 2017. doi : 10.1093/bioinformatics/btw626, is available online at : http://beheco.oxfordjournals.org.Cytoscape appNetwork motifsMotifs in proteinISMAGSPostprint Article