Antibacterial activity of synthetic peptide W5(Os-C) against Staphylococcus epidermidis ATCC 35984

dc.contributor.advisorGaspar, A.R.M. (Anabella Regina Marques)
dc.contributor.coadvisorBester, Megan J.
dc.contributor.emaillizzyvh1@gmail.comen_US
dc.contributor.postgraduatevan Heerden, Lize Janeska
dc.date.accessioned2024-02-16T07:36:32Z
dc.date.available2024-02-16T07:36:32Z
dc.date.created2024-04-16
dc.date.issued2024-02-15
dc.descriptionDissertation (MSc (Biochemistry))--University of Pretoria, 2024.en_US
dc.description.abstractAntimicriobial resistant Staphylococcus epidermidis infections are rapidly increasing. A promising research avenue is the use of antimicrobial peptides (AMPs). From AMP OsDef2, C-terminal fragments Os and Os-C were generated, but activity loss in physiological salt environments limits clinical applications. As an attempt to increase the antimicrobial activity under these conditions, Os-C was tagged on the N-terminal with five tryptophan residues. The minimum inhibitory concentrations (MICs) for the anti-planktonic activity of W5(Os-C) (W), vancomycin (V), and combination ratios 3V:1W and 2V:2W were 2.44 µM, 3.83 µM, 3.31 µM and 3.63 µM respectively. The biofilm inhibition concentrations (BICs) of W5(Os-C), vancomycin, and combination ratios 3V:1W and 2V:2W were 3.81 µM, 3.06 µM, 3.48 µM and 4.51 µM respectively for cell viability, and 3.76 µM, 3.07 µM, 6.68 µM and 4.40 µM respectively for biomass inhibition. Antimicrobial combinations failed to achieve synergism. In silico studies revealed that W5(Os-C) formed dimers or trimers and inserted into a model Gram-positive membrane regardless of salt concentration. Peptide-peptide interactions in a physiological salt environment were both hydrophilic and hydrophobic, but mainly hydrophobic in a higher salt environment. Irrespective of salt concentration, W5(Os-C) inserted into the Gram-positive model membrane via the N-terminal tryptophan tag but inserted deeper in the higher salt environment. In conclusion, N-terminal tagging of Os-C with tryptophan residues increases the anti-planktonic and biofilm inhibitory activity, mediated by dimer/trimer formation and N-terminal insertion into S. epidermidis model membranes.en_US
dc.description.availabilityUnrestricteden_US
dc.description.degreeMSc (Biochemistry)en_US
dc.description.departmentBiochemistryen_US
dc.description.facultyFaculty of Natural and Agricultural Sciencesen_US
dc.description.sponsorshipUniversity of Pretoriaen_US
dc.description.sponsorshipNational Research Foundationen_US
dc.identifier.citation*en_US
dc.identifier.doihttps://doi.org/10.25403/UPresearchdata.25225163en_US
dc.identifier.otherA2024en_US
dc.identifier.urihttp://hdl.handle.net/2263/94669
dc.language.isoenen_US
dc.publisherUniversity of Pretoria
dc.rights© 2023 University of Pretoria. All rights reserved. The copyright in this work vests in the University of Pretoria. No part of this work may be reproduced or transmitted in any form or by any means, without the prior written permission of the University of Pretoria.
dc.subjectUCTDen_US
dc.subjectAntibacterialen_US
dc.subjectStaphylococcus epidermidisen_US
dc.subjectAntimicrobial peptideen_US
dc.subjectMolecular dynamic simulationen_US
dc.subjectVancomycinen_US
dc.subject.otherSustainable Development Goals (SDGs)
dc.subject.otherSDG-03: Good health and well-being
dc.subject.otherNatural and agricultural sciences theses SDG-03
dc.subject.otherSDG-09: Industry, innovation and infrastructure
dc.subject.otherNatural and agricultural sciences theses SDG-09
dc.titleAntibacterial activity of synthetic peptide W5(Os-C) against Staphylococcus epidermidis ATCC 35984en_US
dc.typeDissertationen_US

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