Test positivity – evaluation of a new metric to assess epidemic dispersal mediated by non-symptomatic cases

dc.contributor.authorFasina, Folorunso Oludayo
dc.contributor.authorSalami, Mudasiru A.
dc.contributor.authorFasina, Modupe M.
dc.contributor.authorOtekunrin, Olutosin A.
dc.contributor.authorHoogesteijn, Almira L.
dc.contributor.authorHittner, James B.
dc.date.accessioned2021-10-14T12:10:30Z
dc.date.issued2021-11
dc.description.abstractEpidemic control may be hampered when the percentage of asymptomatic cases is high. Seeking remedies for this problem, test positivity was explored between the first 60 to 90 epidemic days in six countries that reported their first COVID-19 case between February and March 2020: Argentina, Bolivia, Chile, Cuba, Mexico, and Uruguay. Test positivity (TP) is the percentage of test-positive individuals reported on a given day out of all individuals tested the same day. To generate both country-specific and multi-country information, this study was implemented in two stages. First, the epidemiologic data of the country infected last (Uruguay) were analyzed. If at least one TP-related analysis yielded a statistically significant relationship, later assessments would investigate the six countries. The Uruguayan data indicated (i) a positive correlation between daily TP and daily new cases (r = 0.75); (ii) a negative correlation between TP and the number of tests conducted per million inhabitants (TPMI, r = −0.66); and (iii) three temporal stages, which differed from one another in both TP and TPMI medians (p < 0.01) and, together, revealed a negative relationship between TPMI and TP. No significant relationship was found between TP and the number of active or recovered patients. The six countries showed a positive correlation between TP and the number of deaths/million inhabitants (DMI, r = 0.65, p < 0.01). With one exception –a country where isolation was not pursued−, all countries showed a negative correlation between TP and TPMI (r = 0.74). The temporal analysis of country-specific policies revealed four patterns, characterized by: (1) low TPMI and high DMI, (2) high TPMI and low DMI; (3) an intermediate pattern, and (4) high TPMI and high DMI. Findings support the hypothesis that test positivity may guide epidemiologic policy-making, provided that policy-related factors are considered and high-resolution geographical data are utilized.en_ZA
dc.description.departmentVeterinary Tropical Diseasesen_ZA
dc.description.embargo2022-05-25
dc.description.librarianhj2021en_ZA
dc.description.urihttps://www.elsevier.com/locate/ymethen_ZA
dc.identifier.citationFasina, F.O., Salami, M.A., Fasina, M.M. et al. 2021, 'Test positivity – evaluation of a new metric to assess epidemic dispersal mediated by non-symptomatic cases', Methods, vol. 195, pp. 15-22.en_ZA
dc.identifier.issn1046-2023
dc.identifier.other10.1016/j.ymeth.2021.05.017
dc.identifier.urihttp://hdl.handle.net/2263/82119
dc.language.isoenen_ZA
dc.publisherElsevieren_ZA
dc.rights© 2021 Elsevier Inc. All rights reserved. Notice : this is the author’s version of a work that was accepted for publication in Methods. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. A definitive version was subsequently published in Methods, vol. , no. , pp. vol. 195, pp. 15-22, 2021. doi : 10.1016/j.ymeth.2021.05.017.en_ZA
dc.subjectCOVID-19 pandemicen_ZA
dc.subjectCoronavirus disease 2019 (COVID-19)en_ZA
dc.subjectTest positivity (TP)en_ZA
dc.subjectGeo-epidemiologyen_ZA
dc.subjectResource-limited countriesen_ZA
dc.subjectInfectionen_ZA
dc.subject.otherVeterinary science articles SDG-03en_ZA
dc.subject.otherSDG-03: Good health and well-being
dc.titleTest positivity – evaluation of a new metric to assess epidemic dispersal mediated by non-symptomatic casesen_ZA
dc.typePostprint Articleen_ZA

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