Commentary on the proposed Section 10 amendments to the International Code of Nomenclature of Prokaryotes regarding Candidatus names

dc.contributor.authorWhitman, William B.
dc.contributor.authorVenter, S.N. (Stephanus Nicolaas)
dc.contributor.emailfanus.venter@fabi.up.ac.zaen_US
dc.date.accessioned2024-07-05T12:54:43Z
dc.date.issued2024-07
dc.descriptionDATA AVAILABILITY : No data was used for the research described in the article.en_US
dc.description.abstractAmendments were proposed to the International Code of Nomenclature of Prokaryotes (ICNP) in January [Arahal et al. (2024) Int. J Syst. Evol. Microbiol. 74: 006188] that would cause major changes in the treatment of Candidatus names. The amendments introduce Section 10 to name taxa whose names cannot be validly published under the ICNP because of the absence of type strains. This section creates a parallel ‘pro-nomenclature’ and formalizes alternative material which could serve as nomenclatural types. When conspecific isolates of taxa with Candidatus names are deposited in culture collections as type strains, the names can be validly published, and it is required that the same Candidatus name be used. While the amendments are promoted to provide stable names and rules of nomenclature for uncultivated taxa, the system is deeply flawed. It removes the permanent association between names and types, which will make the meaning of names imprecise and ambiguous. It creates ‘pro-nomenclature’, which is confusing and unnecessary. Since many taxa which cannot be validly named under the ICNP can already be named under the SeqCode, it duplicates and creates overlap with an established nomenclatural system without providing tangible benefits. As the SeqCode recognizes names formed under the ICNP, the ICNP should recognize names formed under the SeqCode as they have done for the Cyanobacteria named under the International Code of Nomenclature for algae, fungi and plants (ICN). For these reasons, we urge the members of the International Committee of Systematics of Prokaryotes (ICSP) to reject these amendments.en_US
dc.description.departmentBiochemistryen_US
dc.description.departmentGeneticsen_US
dc.description.departmentMicrobiology and Plant Pathologyen_US
dc.description.embargo2025-06-15
dc.description.librarianhj2024en_US
dc.description.sdgNoneen_US
dc.description.urihttps://www.elsevier.com/locate/syapmen_US
dc.identifier.citationWhitman, W.B. & Venter, S.N. 2024, 'Commentary on the proposed Section 10 amendments to the International Code of Nomenclature of Prokaryotes regarding Candidatus names', Systematic and Applied Microbiology, vol. 47, no. 4, art. 126524, pp. 1-4, doi : 10.1016/j.syapm.2024.126524.en_US
dc.identifier.issn0723-2020 (print)
dc.identifier.issn1618-0984 (online)
dc.identifier.other10.1016/j.syapm.2024.126524
dc.identifier.urihttp://hdl.handle.net/2263/96838
dc.language.isoenen_US
dc.publisherElsevieren_US
dc.rights© 2024 Elsevier GmbH. All rights reserved. Notice : this is the author’s version of a work that was accepted for publication in Systematic and Applied Microbiology. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. A definitive version was subsequently published in Systematic and Applied Microbiology, vol. 47, no. 4, art. 126524, pp. 1-4, 2024, doi : 10.1016/j.syapm.2024.126524.en_US
dc.subjectInternational Code of Nomenclature of Prokaryotes (ICNP)en_US
dc.subjectCandidatusen_US
dc.subjectICNP amendmentsen_US
dc.subjectSeqCodeen_US
dc.titleCommentary on the proposed Section 10 amendments to the International Code of Nomenclature of Prokaryotes regarding Candidatus namesen_US
dc.typePostprint Articleen_US

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