Rahnella perminowiae sp. nov., Rahnella bonaserana sp. nov., Rahnella rivi sp. nov. and Rahnella ecdela sp. nov., isolated from diverse environmental sources, and emended description of the genus Rahnella

dc.contributor.authorBrady, Carrie L.
dc.contributor.authorAsselin, Jo Ann
dc.contributor.authorBeer, Steven
dc.contributor.authorBrurberg, May Bente
dc.contributor.authorCrampton, Bridget Genevieve
dc.contributor.authorVenter, S.N. (Stephanus Nicolaas)
dc.contributor.authorArnold, Dawn
dc.contributor.authorDenman, Sandra
dc.date.accessioned2022-12-14T13:09:18Z
dc.date.available2022-12-14T13:09:18Z
dc.date.issued2022-01-20
dc.description.abstractBacteria isolated from onion bulbs suffering from bacterial decay in the United States and Norway were previously shown to belong to the genus Rahnella based on partial housekeeping gene sequences and/or fatty acid analysis. However, many strains could not be assigned to any existing Rahnella species. Additionally, strains isolated from creek water and oak as well as a strain with bioremediation properties were assigned to Rahnella based on partial housekeeping gene sequences. The taxonomic status of these 21 strains was investigated using multilocus sequence analysis, whole genome analyses, phenotypic assays and fatty acid analysis. Phylogenetic and phylogenomic analyses separated the strains into five clusters, one of which corresponded to Rahnella aceris. The remaining four clusters could be differentiated both genotypically and phenotypically from each other and existing Rahnella species. Based on these results, we propose the description of four novel species: Rahnella perminowiae sp. nov. (type strain SL6T=LMG 32257T=DSM 112609T), Rahnella bonaserana sp. nov. (H11bT=LMG 32256T=DSM 112610T), Rahnella rivi sp. nov. (FC061912-KT=LMG 32259T=DSM 112611T) and Rahnella ecdela sp. nov. (FRB 231T=LMG 32255T=DSM 112612T).en_US
dc.description.departmentBiochemistryen_US
dc.description.departmentForestry and Agricultural Biotechnology Institute (FABI)en_US
dc.description.departmentGeneticsen_US
dc.description.departmentMicrobiology and Plant Pathologyen_US
dc.description.sponsorshipThis research was supported by the UK Research and Innovation’s (UKRI) Strategic Priorities Fund (SPF) programme on Bacterial Plant Diseases (grant BB/T010886/1) funded by the Biotechnology and Biological Sciences Research Council (BBSRC), the Department for Environment, Food and Rural Affairs (Defra), the Natural Environment Research Council (NERC) and the Scottish Government. CB received additional funding from Woodland Heritage, BC and SD received funding from the Forestry Commission.en_US
dc.description.urihttps://www.microbiologyresearch.org/content/journal/ijsemen_US
dc.identifier.citationBrady, C., Asselin, J.A., Beer, S., Brurberg, M.B., Crampton, B., Venter, S., Arnold, D. & Denman, S. Rahnella perminowiae sp. nov., Rahnella bonaserana sp. nov., Rahnella rivi sp. nov. and Rahnella ecdela sp. nov., isolated from diverse environmental sources, and emended description of the genus Rahnella. International Journal of Systematic and Evolutionary Microbiology 2022 Jan;72(1). doi: 10.1099/ijsem.0.005190. PMID: 35133259.en_US
dc.identifier.issn1466-5026 (print)
dc.identifier.issn1466-5034 (online)
dc.identifier.other10.1099/ijsem.0.005190
dc.identifier.urihttps://repository.up.ac.za/handle/2263/88814
dc.language.isoenen_US
dc.publisherMicrobiology Societyen_US
dc.rights© 2022 The Authorsen_US
dc.subjectRahnellaen_US
dc.subjectYersiniaceaeen_US
dc.subjectBacterial decayen_US
dc.subjectOnionen_US
dc.subjectAcute oak declineen_US
dc.titleRahnella perminowiae sp. nov., Rahnella bonaserana sp. nov., Rahnella rivi sp. nov. and Rahnella ecdela sp. nov., isolated from diverse environmental sources, and emended description of the genus Rahnellaen_US
dc.typeArticleen_US

Files

Original bundle

Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
Brady_Rahnella_2022.pdf
Size:
2.29 MB
Format:
Adobe Portable Document Format
Description:
Article

License bundle

Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
license.txt
Size:
1.75 KB
Format:
Item-specific license agreed upon to submission
Description: