Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata

dc.contributor.authorWingfield, Brenda D.
dc.contributor.authorBills, Gerald F.
dc.contributor.authorDong, Yang
dc.contributor.authorHuang, Wenli
dc.contributor.authorNel, Wilma Janine
dc.contributor.authorSwalarsk-Parry, Benedicta S.
dc.contributor.authorVaghefi, Niloofar
dc.contributor.authorWilken, Pieter Markus
dc.contributor.authorAn, Zhiqiang
dc.contributor.authorDe Beer, Z. Wilhelm
dc.contributor.authorDe Vos, Lieschen
dc.contributor.authorChen, Li
dc.contributor.authorDuong, Tuan A.
dc.contributor.authorGao, Yun
dc.contributor.authorHammerbacher, Almuth
dc.contributor.authorKikkert, Julie R.
dc.contributor.authorLi, Yan
dc.contributor.authorLi, Huiying
dc.contributor.authorLi, Kuan
dc.contributor.authorLi, Qiang
dc.contributor.authorLiu, Xingzhong
dc.contributor.authorMa, Xiao
dc.contributor.authorNaidoo, Kershney
dc.contributor.authorPethybridge, Sarah J.
dc.contributor.authorSun, Jingzu
dc.contributor.authorSteenkamp, Emma Theodora
dc.contributor.authorVan der Nest, Magrieta Aletta
dc.contributor.authorVan Wyk, Stephanie
dc.contributor.authorWingfield, Michael J.
dc.contributor.authorXiong, Chuan
dc.contributor.authorYue, Qun
dc.contributor.authorZhang, Xiaoling
dc.contributor.emailbrenda.wingfield@up.ac.zaen_ZA
dc.date.accessioned2019-10-15T07:38:49Z
dc.date.available2019-10-15T07:38:49Z
dc.date.issued2018-06-11
dc.description.abstractDraft genomes of the species Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina and Morchella septimelata are presented. Both mating types (MAT1-1 and MAT1-2) of Cercospora beticola are included. Two strains of Coleophoma cylindrospora that produce sulfated homotyrosine echinocandin variants, FR209602, FR220897 and FR220899 are presented. The sequencing of Aspergillus mulundensis, Coleophoma cylindrospora and Phialophora cf. hyalina has enabled mapping of the gene clusters encoding the chemical diversity from the echinocandin pathways, providing data that reveals the complexity of secondary metabolism in these different species. Overall these genomes provide a valuable resource for understanding the molecular processes underlying pathogenicity (in some cases), biology and toxin production of these economically important fungi.en_ZA
dc.description.departmentBiochemistryen_ZA
dc.description.departmentForestry and Agricultural Biotechnology Institute (FABI)en_ZA
dc.description.departmentGeneticsen_ZA
dc.description.departmentMicrobiology and Plant Pathologyen_ZA
dc.description.departmentZoology and Entomologyen_ZA
dc.description.librarianam2019en_ZA
dc.description.sponsorshipThe authors of the research on the Berkeleyomyces basicola, Ceratocystis smalleyi, and Fusarium fracticaudum genomes thank the University of Pretoria, the Tree Protection Co-operative Programme (TPCP), the DST-NRF Centre of Excellence in Tree Health Biotechnology, the National Research Foundation, the Genomics Research Institute (GRI) and the DST-NRF SARCHI chair on Fungal Genomics for their financial support. The research on Cercospora beticola was supported by the United States Department of Agriculture, National Institute of Food and Agriculture Hatch project NYG-625424, and the Director’s Controlled Endowment Fund of The New York Agricultural Experiment Station, Cornell University, Geneva, New York, USA. The research on the genomes of Coleophoma cylindrospora, Phialophora cf. hyalina, and Aspergillus mulundensis was supported by the National Natural Science Foundation of China (NSFC) grants 31629001 to Z.A., 31741004 to Q.Y., Welch Foundation Grant AU- 0042-20030616 to ZA, and the Kay and Ben Fortson Endowment to GFB.en_ZA
dc.description.urihttp://www.imafungus.orgen_ZA
dc.identifier.citationWingfield, B.D., Bills, G.F., Dong, Y. et al. 2018, 'Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata', IMA Fungus, vol. 9, no, 1, pp. 199-223.en_ZA
dc.identifier.issn2210-6340 (print)
dc.identifier.issn2210-6359 (online)
dc.identifier.issn10.5598/imafungus.2018.09.01.13
dc.identifier.urihttp://hdl.handle.net/2263/71822
dc.language.isoenen_ZA
dc.publisherInternational Mycological Associationen_ZA
dc.rights© 2019 International Mycological Associationen_ZA
dc.subjectBeta vulgarisen_ZA
dc.subjectCarya cordiformisen_ZA
dc.subjectEchinocandin gene clustersen_ZA
dc.subjectMulundocandinsen_ZA
dc.subjectPitch cankeren_ZA
dc.subjectPeumocandinsen_ZA
dc.titleDraft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelataen_ZA
dc.typeArticleen_ZA

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