Seasonal succession of fungi associated with Ips typographus beetles and their phoretic mites in an outbreak region of Finland
dc.contributor.author | Linnakoski, Riikka | |
dc.contributor.author | Mahilainen, Saila | |
dc.contributor.author | Harrington, Alison | |
dc.contributor.author | Vanhanen, Henri | |
dc.contributor.author | Eriksson, Miikka | |
dc.contributor.author | Mehtatalo, Lauri | |
dc.contributor.author | Pappinen, Ari | |
dc.contributor.author | Wingfield, Michael J. | |
dc.date.accessioned | 2016-06-10T06:14:38Z | |
dc.date.available | 2016-06-10T06:14:38Z | |
dc.date.issued | 2016-05-17 | |
dc.description | The sequence data generated in this study are available in GenBank database (accession numbers KT896627- KT896658). Representative isolates of ophiostomatoid fungi are preserved in the Culture Collection (CMW) of the Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, South Africa. | en_ZA |
dc.description.abstract | The ophiostomatoid fungi (Microascales and Ophiostomatales, Ascomycota) are common associates of Ips typographus, and include tree pathogens and species responsible for blue-stain of timber. Fungal assemblages associated with I. typographus have varied considerably between studies but few investigations have attempted to explain this variation. For this reason, we assessed the overall cultivable fungal diversity associated with I. typographus in a storm-felled spruce forest in south-eastern Finland. Fungi were isolated from the individually collected beetles as well as their phoretic mites in spring, summer and autumn, including different life stages of the beetle (hibernation, dispersal flight and first generation). The internal transcribed spacer (ITS) gene region was used to identify the fungi. A total of 32 operational taxonomic units (OTUs) were found and these resided in four fungal phyla/subphyla (24 Ascomycota, 2 Basidiomycota, 5 Mucoromycotina, 1 Mortierellomycotina) in association with adult bark beetles. Ophiostomatoid species were the most commonly detected fungal associates. A generalized linear model analysis showed a clear association between fungal communities and season, indicating seasonal succession among I. typographus-associated fungi. The season of sampling appears to be an important factor that has resulted in inconsistencies between results in previous studies. Many of these fungi were also found on phoretic mites and their presence or absence could have influenced variation in patterns of association. | en_ZA |
dc.description.department | Forestry and Agricultural Biotechnology Institute (FABI) | en_ZA |
dc.description.department | Microbiology and Plant Pathology | en_ZA |
dc.description.librarian | am2016 | en_ZA |
dc.description.sponsorship | The University of Helsinki, https://www. helsinki.fi/en (RL); Jouko Tuovolan Säätiö (SM); The Olvi Foundation, http://www.olvisaatio.fi/web/ olvisaatio/ (SM); The Thomas J. Watson Fellowship granted by the Watson Foundation, http://watson. foundation (AH); The Natural Resources Institute Finland (Luke), https://www.luke.fi/en (HV); The University of Eastern Finland, http://www.uef.fi/en (ME, LM, AP); The University of Pretoria, http://www. up.ac.za (RL, MJW); The members of the Tree Protection Co-operative Programme (TPCP) and the THRIP initiative of the Department of Trade and Industry, South Africa (RL, MJW). | en_ZA |
dc.description.uri | http://www.plosone.org | en_ZA |
dc.identifier.citation | Linnakoski R, Mahilainen S, Harrington A, Vanhanen H, Eriksson M, Mehtätalo L, et al. (2016) Seasonal Succession of Fungi Associated with Ips typographus Beetles and Their Phoretic Mites in an Outbreak Region of Finland. PLoS ONE 11(5): e0155622. DOI: 10.1371/journal.pone.0155622. | en_ZA |
dc.identifier.issn | 1932-6203 | |
dc.identifier.other | 10.1371/journal.pone.0155622 | |
dc.identifier.uri | http://hdl.handle.net/2263/53023 | |
dc.language.iso | en | en_ZA |
dc.publisher | Public Library of Science | en_ZA |
dc.rights | © 2016 Linnakoski et al. This is an open access article distributed under the terms of the Creative Commons Attribution License. | en_ZA |
dc.subject | Ips typographus | en_ZA |
dc.subject | Beetle | en_ZA |
dc.subject | Internal transcribed spacer | en_ZA |
dc.subject | Ophiostomatoid fungi (Microascales) | en_ZA |
dc.subject | Ophiostomatoid fungi (Ophiostomatales, Ascomycota) | en_ZA |
dc.title | Seasonal succession of fungi associated with Ips typographus beetles and their phoretic mites in an outbreak region of Finland | en_ZA |
dc.type | Article | en_ZA |