Molecular analysis of South African ovine herpesvirus 2 strains based on selected glycoprotein and tegument genes

dc.contributor.authorDoboro, Fulufhelo Amanda
dc.contributor.authorNjiro, Stephen
dc.contributor.authorSibeko-Matjila, Kgomotso Penelope
dc.contributor.authorVan Vuuren, Moritz
dc.date.accessioned2017-05-31T05:57:28Z
dc.date.available2017-05-31T05:57:28Z
dc.date.issued2016-03-22
dc.descriptionS1 Table. Average sequence identities determined for the Ov 7 nucleotide and amino sequences obtained between South African Ov 7 sequences compared to reference sequences.en_ZA
dc.descriptionS2 Table. Average sequence identities determined for the Ov 8 ex2 nucleotide (Figure A) and derived amino acid (Figure B) sequences obtained between South African OvHV-2 strains compared to reference strains.en_ZA
dc.descriptionS3 Table. Average sequence identities determined for the ORF 27 nucleotide and derived amino acid sequences obtained between South African OvHV-2 strains compared to reference strains.en_ZA
dc.descriptionS4 Table. Average sequence identities for the ORF 73 nucleotide and derived amino acid sequences obtained between South African OvHV-2 strains compared to reference strains.en_ZA
dc.description.abstractOvine herpesvirus 2 (OvHV-2), is the causative agent of sheep-associated malignant catarrhal fever (SA-MCF), a generally fatal disease of cattle and other captive wild ruminants. Information on the OvHV-2 strains circulating in South Africa (SA) and other African countries with regard to genetic structure and diversity, and pattern of distribution is not available. This study aimed to characterize the OvHV-2 strains circulating in SA using selected genes encoding glycoproteins and tegument proteins. To establish the genetic diversity of OvHV-2 strains, four genes, Ov 7, Ov 8 ex2, ORF 27 and ORF 73 were selected for analysis by PCR and DNA sequencing. Nucleotide and amino acid multiple sequence analyses revealed two genotypes for ORF 27 and ORF 73, and three genotypes for Ov 7 and Ov 8 ex2, randomly distributed throughout the regions. Ov 7 and ORF 27 nucleotide sequence analysis revealed variations that distinguished SA genotypes from those of reference OvHV-2 strains. Epitope mapping analysis showed that mutations identified from the investigated genes are not likely to affect the functions of the gene products, particularly those responsible for antibody binding activities associated with B-cell epitopes. Knowledge of the extent of genetic diversity existing among OvHV-2 strains has provided an understanding on the distribution patterns of OvHV-2 strains or genotypes across the regions of South Africa. This can facilitate the management of SA-MCF in SA, in terms of introduction of control measures or safe practices to monitor and control OvHV-2 infection. The products encoded by the Ov 7, Ov 8 ex2 and ORF 27 genes are recommended for evaluation of their coded proteins as possible antigens in the development of an OvHV-2 specific serodiagnostic assay.en_ZA
dc.description.departmentVeterinary Tropical Diseasesen_ZA
dc.description.librarianam2017en_ZA
dc.description.sponsorshipThis work was supported by Department of Science and Technology (DST) for research funding; Meat Industry Trust (MIT) for payment of the University tuitions.en_ZA
dc.description.urihttp://www.plosone.orgen_ZA
dc.identifier.citationDoboro FA, Njiro S, Sibeko-Matjila K, Van Vuuren M (2016) Molecular Analysis of South African Ovine Herpesvirus 2 Strains Based on Selected Glycoprotein and Tegument Genes. PLoS ONE 11(3): e0147019. DOI: 10.1371/journal.pone.0147019.en_ZA
dc.identifier.issn1932-6203
dc.identifier.other10.1371/journal.pone.0147019
dc.identifier.urihttp://hdl.handle.net/2263/60720
dc.language.isoenen_ZA
dc.publisherPublic Library of Scienceen_ZA
dc.rights© 2016 Doboro et al. This is an open access article distributed under the terms of the Creative Commons Attribution License.en_ZA
dc.subjectCattleen_ZA
dc.subjectSouth Africa (SA)en_ZA
dc.subjectOvine herpesvirus 2 (OvHV-2)en_ZA
dc.subjectSheep-associated malignant catarrhal fever (SA-MCF)en_ZA
dc.titleMolecular analysis of South African ovine herpesvirus 2 strains based on selected glycoprotein and tegument genesen_ZA
dc.typeArticleen_ZA

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