Identification of Armillaria species on declined oak in Britain : implications for oak health

dc.contributor.authorDenman, Sandra
dc.contributor.authorBarrett, Glyn
dc.contributor.authorKirk, Susan A.
dc.contributor.authorMcDonald, James E.
dc.contributor.authorCoetzee, Martin Petrus Albertus
dc.date.accessioned2017-02-14T10:46:49Z
dc.date.issued2017-01
dc.description.abstractThe identity of 51 isolates of Armillaria from 15 Quercus robur trees in poor health, and a single healthy tree, at nine sites in England, was determined using multilocus sequence analysis (MLSA) of three gene regions. Sequences of the ITS-1, IGS-1 and EF-1α gene regions were obtained by polymerase chain reaction (PCR) amplification and sequencing, and phylogenetic trees were generated based on maximum likelihood and Bayesian inference of phylogenies. Four Armillaria species were isolated: Armillaria gallica, A. mellea, A. ostoyae and A. tabescens. Armillaria gallica was most frequently isolated (40/51 isolates), but only from woodland trees. Armillaria mellea was isolated infrequently (3/51), from garden trees; A. tabescens was isolated infrequently (4/51), from trees either in a garden or a parkland location. Armillaria ostoyae (4/51 isolates) was co-isolated with A. gallica, raising interesting questions about the synecology of these species, suggesting that more thorough investigations are required to detect all species present on a single host. The distribution of these Armillaria species in Britain and historical information about them on oak are described. It is concluded that further studies are necessary to determine the role of Armillaria in oak declines; A. gallica should be a key focus, but investigations should include polymicrobial interactions with other microorganisms, including other Armillaria species.en_ZA
dc.description.departmentGeneticsen_ZA
dc.description.embargo2018-01-31
dc.description.librarianhb2017en_ZA
dc.description.sponsorshipThe Forestry Commission, Woodland Heritage and the Rothschilds Foundation.en_ZA
dc.description.urihttp://forestry.oxfordjournals.orgen_ZA
dc.identifier.citationDenman, S, Barrett, G, Kirk, SA, McDonald, JE & Coetzee, MPA 2017, 'Identification of Armillaria species on declined oak in Britain: implications for oak health', Forestry, vol. 90, no. 1, pp. 148-161en_ZA
dc.identifier.issn0015-752X (print)
dc.identifier.issn1464-3626 (online)
dc.identifier.other10.1093/forestry/cpw054
dc.identifier.urihttp://hdl.handle.net/2263/59033
dc.language.isoenen_ZA
dc.publisherOxford University Pressen_ZA
dc.rights© Crown copyright 2016. This is a pre-copy-editing, author-produced PDF of an article accepted for publication in Forestry following peer review. The definitive publisher-authenticated version is : Identification of Armillaria species on declined oak in Britain : implications for oak health, Forestry, vol. 90, no. 1, pp. 148-161, 2017. doi : 10.1093/forestry/cpw054, is available online at : http://forestry.oxfordjournals.org.en_ZA
dc.subjectArmillaria-root-roten_ZA
dc.subjectForest-pathologyen_ZA
dc.subjectPolymicrobial-diseaseen_ZA
dc.subjectQuercus roburen_ZA
dc.subjectMulti locus sequence analysis (MLSA)en_ZA
dc.titleIdentification of Armillaria species on declined oak in Britain : implications for oak healthen_ZA
dc.typePostprint Articleen_ZA

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