Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa

dc.contributor.authorMbelle, Nontombi Marylucy
dc.contributor.authorManingi, Nontuthuko Excellent
dc.contributor.authorTshisevhe, Vhudzani
dc.contributor.authorModipane, Lesedi
dc.contributor.authorAmoako, Daniel Gyamfi
dc.contributor.authorOsei Sekyere, John
dc.date.accessioned2018-10-18T04:59:59Z
dc.date.available2018-10-18T04:59:59Z
dc.date.issued2017-11-30
dc.description.abstractWe report the first draft genome sequence of an Enterococcus faecium sequence type 18 (ST18) strain isolated from a tuberculosis patient in Africa. The genome is comprised of 3,202,539 bp, 501 contigs, 37.70% GC content, 3,202 proteinencoding genes, and 61 RNA genes. The resistome and virulome of this important pathogen are presented herein.en_ZA
dc.description.departmentMedical Microbiologyen_ZA
dc.description.librarianam2018en_ZA
dc.description.sponsorshipGrant 94445 of the National Health Laboratory Services of South Africa.en_ZA
dc.description.urihttp://genomea.asm.orgen_ZA
dc.identifier.citationMbelle NM, Maningi NE, Tshisevhe V, Modipane L, Amoako DG, Osei Sekyere J. 2017. Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa. Genome Announc 5:e01381-17. https://DOI.org/10.1128/genomeA.01381-17.en_ZA
dc.identifier.issn2169-8287 (online)
dc.identifier.other10.1128/genomeA.01381-17
dc.identifier.urihttp://hdl.handle.net/2263/66931
dc.language.isoenen_ZA
dc.publisherAmerican Society for Microbiologyen_ZA
dc.rights© 2018 [Author et al]. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license.en_ZA
dc.subjectWhole genome sequencing (WGS)en_ZA
dc.subjectUrinary tract infection (UTI)en_ZA
dc.subjectTuberculosis (TB)en_ZA
dc.subjectSouth Africa (SA)en_ZA
dc.subjectRNA geneen_ZA
dc.subjectMultidrug-resistant (MDR)en_ZA
dc.subjectMicrobial genomeen_ZA
dc.subjectHydrolysisen_ZA
dc.subjectgyrA geneen_ZA
dc.subjectGenetic resistanceen_ZA
dc.subjectGenetic codeen_ZA
dc.subjectGene mutationen_ZA
dc.subjectGene identificationen_ZA
dc.subjectEnterococcus faeciumen_ZA
dc.subjectDrug screeningen_ZA
dc.subjectCell adhesionen_ZA
dc.subjectBacterium isolateen_ZA
dc.subjectBacterial virulenceen_ZA
dc.subjectBacterial strainen_ZA
dc.subjectBacterial genomeen_ZA
dc.subjectBacterial cell wallen_ZA
dc.subjectAntibiotic sensitivityen_ZA
dc.subjectAnaerobic growthen_ZA
dc.subjectUntranslated RNAen_ZA
dc.subjectTransfer RNAen_ZA
dc.subjectTetracyclineen_ZA
dc.subjectStreptomycinen_ZA
dc.subjectRibosome RNAen_ZA
dc.subjectQuinolone derivativeen_ZA
dc.subjectProtein ParCen_ZA
dc.subjectMoxifloxacinen_ZA
dc.subjectGentamicinen_ZA
dc.subjectGenomic DNAen_ZA
dc.subjectCollagen binding proteinen_ZA
dc.subjectClindamycinen_ZA
dc.subjectCiprofloxacinen_ZA
dc.subjectAgaroseen_ZA
dc.titleDraft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africaen_ZA
dc.typeArticleen_ZA

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