Functional redundancy buffers the effect of poly-extreme environmental conditions on southern African dryland soil microbial communities

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Authors

Sauma-Sánchez, Tomás
Alcorta, Jaime
Tamayo-Leiva, Javier
Diez, Beatriz
Bezuidenhout, Hugo
Cowan, Don A.
Ramond, Jean-Baptiste

Journal Title

Journal ISSN

Volume Title

Publisher

Oxford University Press

Abstract

Drylands’ poly-extreme conditions limit edaphic microbial diversity and functionality. Furthermore, climate change exacerbates soil desiccation and salinity in most drylands. To better understand the potential effects of these changes on dryland microbial communities, we evaluated their taxonomic and functional diversities in two Southern African dryland soils with contrasting aridity and salinity. Fungal community structure was significantly influenced by aridity and salinity, while Bacteria and Archaea only by salinity. Deterministic homogeneous selection was significantly more important for bacterial and archaeal communities’ assembly in hyperarid and saline soils when compared to those from arid soils. This suggests that niche partitioning drives bacterial and archaeal communities' assembly under the most extreme conditions. Conversely, stochastic dispersal limitations drove the assembly of fungal communities. Hyperarid and saline soil communities exhibited similar potential functional capacities, demonstrating a disconnect between microbial structure and function. Structure variations could be functionally compensated by different taxa with similar functions, as implied by the high levels of functional redundancy. Consequently, while environmental selective pressures shape the dryland microbial community assembly and structures, they do not influence their potential functionality. This suggests that they are functionally stable and that they could be functional even under harsher conditions, such as those expected with climate change.

Description

DATA AVAILABITY STATEMENT: The sequencing data is available in the NCBI Sequence Read Archive (SRA) under BioProject accession number PRJNA1067640 for paired-end reads (joined reads) for 16S rRNA and ITS genes amplicon sequencing and raw paired-end reads for the shotgun metagenomes.
SUPPORTING INFORMATION: Supplementary data is available at FEMSEC Journal online.

Keywords

Dryland soils, Edaphic microbial communities, Functional redundancy, Metabarcoding, Niche partitioning, Shotgun metagenomics, SDG-13: Climate action, SDG-15: Life on land

Sustainable Development Goals

SDG-13:Climate action
SDG-15:Life on land

Citation

Tomás Sauma-Sánchez, Jaime Alcorta, Javier Tamayo-Leiva, Beatriz Díez, Hugo Bezuidenhout, Don A Cowan, Jean-Baptiste Ramond, Functional redundancy buffers the effect of poly-extreme environmental conditions on southern African dryland soil microbial communities, FEMS Microbiology Ecology, Volume 100, Issue 12, December 2024, fiae157, https://doi.org/10.1093/femsec/fiae157.