Chemodiversity of penicillium isolated from alpine and arctic environments, including ten new species
| dc.contributor.author | Overy, D.P. | |
| dc.contributor.author | Frisvad, J.C. | |
| dc.contributor.author | Witte, T.E. | |
| dc.contributor.author | Hicks, C.L. | |
| dc.contributor.author | Hermans, A. | |
| dc.contributor.author | Sproule, A. | |
| dc.contributor.author | Louis-Seize, G. | |
| dc.contributor.author | Seifer, K.A. | |
| dc.contributor.author | Yilmaz, Neriman | |
| dc.contributor.author | Price, Jodi | |
| dc.contributor.author | Van Vuuren, Nicole Innike | |
| dc.contributor.author | Visagie, Cobus M. | |
| dc.contributor.email | cobus.visagie@fabi.up.ac.za | |
| dc.date.accessioned | 2025-10-28T06:50:46Z | |
| dc.date.available | 2025-10-28T06:50:46Z | |
| dc.date.issued | 2025-08-01 | |
| dc.description | DATA AVAILABILITY : The sequences generated in this study are deposited with NCBI GenBank (See Table 1). The aligned DNA sequence datasets, partitioning schemes and tree files were uploaded to the University of Pretoria’s research data repository hosted on Figshare https://doi.org/10.25403/UPresearchdata.27117037. | |
| dc.description.abstract | Polar, high altitude montane and cold desert environments harbour only sparse plant life and often remain frozen for extended periods. Because of their remoteness, often combined with restricted access, such regions are rarely visited and the fungal biodiversity of the soils is scarcely studied. Despite this, when such studies are undertaken, psychrophilic Penicillium species are often reported and the isolates exhibit a high spectrum of biologically active compounds of biotechnological interest. Small molecule profiling by mass spectrometry (often called ‘metabolomics’) can supplement phylogenetic species concepts and provide information to characterize variation within species or populations. During large scale fungal isolation surveys exploring new psychrophilic fungi from high altitude alpine and arctic tundra soils, several undescribed Penicillium species were discovered. A polyphasic taxonomic approach was adopted to formally describe ten new species using multigene phylogenetic analyses and phenotypic characterizations including secondary metabolite production, colony characters, and microscopic analysis of morphological structures. Using untargeted metabolomics and molecular networking tools, an emphasis was made to characterize, compare and discuss in depth, the chemical diversity associated with these new Penicillium species. | |
| dc.description.department | Biochemistry, Genetics and Microbiology (BGM) | |
| dc.description.department | Forestry and Agricultural Biotechnology Institute (FABI) | |
| dc.description.librarian | am2025 | |
| dc.description.sdg | SDG-15: Life on land | |
| dc.description.sponsorship | Funding for this research was provided by the Science & Technology Branch of Agriculture & Agri-Food Canada; the Alfred P. Sloan Foundation Program on the Microbiology of the Built Environment and the European Union’s Horizon 2020 research and innovation program (RISE) [under the Marie Skłodowska-Curie grant]; and the Danish Research Council. | |
| dc.description.uri | https://www.sciencedirect.com/journal/studies-in-mycology | |
| dc.identifier.citation | Overy, D.P., Frisvad, J.C., Witte, T.E., Hicks, C.L., Hermans, A., Sproule, A., Louis-Seize, G., Seifert, K.A., Yilmaz, N., Price, J., Van Vuuren, N.I. & Visagie, C.M. (2025). Chemodiversity of Penicillium isolated from alpine and arctic environments, including ten new species. Studies in Mycology 112: 75–116. doi: 10.3114/ sim.2025.112.03 | |
| dc.identifier.issn | 0166-0616 | |
| dc.identifier.other | 10.3114/ sim.2025.112.03 | |
| dc.identifier.other | 10.25403/UPresearchdata.27117037 | |
| dc.identifier.uri | http://hdl.handle.net/2263/105007 | |
| dc.language.iso | en | |
| dc.publisher | Westerdijk Fungal Biodiversity Institute | |
| dc.rights | © 2025 Westerdijk Fungal Biodiversity Institute. This is an open access article under the CC BY-NC-ND license. | |
| dc.subject | Extrolites | |
| dc.subject | Fasciculata | |
| dc.subject | Genealogical concordance phylogenetic species recognition (GCPSR) | |
| dc.subject | New taxa | |
| dc.subject | Ramosum | |
| dc.subject | Robsamsonia | |
| dc.subject | Taxonomy | |
| dc.title | Chemodiversity of penicillium isolated from alpine and arctic environments, including ten new species | |
| dc.type | Article |
