Phylogenetic relationships among biological species of Armillaria from China

dc.contributor.authorCoetzee, Martin Petrus Albertus
dc.contributor.authorWingfield, Brenda D.
dc.contributor.authorZhao, Jun
dc.contributor.authorVan Coller, Sophia Johanna
dc.contributor.authorWingfield, Michael J.
dc.contributor.emailmartin.coetzee@fabi.up.ac.zaen_ZA
dc.date.accessioned2016-08-15T14:30:58Z
dc.date.issued2015-09
dc.description.abstractFourteen Chinese Biological Species (CBS) of Armillaria were previously identified in a collection of Chinese isolates. CBS C, F, G, H, J, L, N and O remained unnamed, while the remaining isolates included A. borealis, A. cepistipes, A. gallica, A. mellea, A. sinapina and A. tabescens. CBS F was suggested to represent A. singula based on basidiocarp morphology. In this study, phylogenetic relationships between Chinese Armillaria isolates and those from other parts of the world were determined based on DNA sequence data. Results of this study suggest that CBS F might not represent A. singula, and that A. monadelpha (a name applied to the North American form of A. tabescens by some authors) and A. tabescens should be treated as a single species. Four main phylogenetic lineages, referred to as the A. ostoyae, A. gallica, A. tabescens and A. mellea clusters, were identified on the phylogenetic trees. The unnamed biological species grouped within the “A. gallica cluster” and were phylogenetically closely related. The results of this study contribute to our current understanding of the systematics of Armillaria from South East Asia where these fungi are relatively poorly known.en_ZA
dc.description.departmentGeneticsen_ZA
dc.description.embargo2017-09-30
dc.description.librarianhb2016en_ZA
dc.description.sponsorshipTree Protection Co-operative Programme (TPCP), the National Research Foundation (NRF), the THRIP initiative of the Department of Trade and Industry and the DST/NRF Centre of Excellence in Tree Health Biotechnology (CTHB) South Africa.en_ZA
dc.description.urihttp://www.elsevier.com/locate/mycen_ZA
dc.identifier.citationCoetzee, MPA, Wingfield, BD, Zhao, J, Van Coller, SJ & Wingfield, MJ 2015, 'Phylogenetic relationships among biological species of Armillaria from China', Mycoscience, vol. 56, no. 5, pp. 530-541.en_ZA
dc.identifier.issn1340-3540 (print)
dc.identifier.issn1618-2545 (online)
dc.identifier.other10.1016/j.myc.2015.05.001
dc.identifier.urihttp://hdl.handle.net/2263/56311
dc.language.isoenen_ZA
dc.publisherElsevieren_ZA
dc.rights© 2015 The Mycological Society of Japan. Published by Elsevier B.V. All rights reserved. Notice : this is the author’s version of a work that was accepted for publication in Mycoscience. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. A definitive version was subsequently published in Mycoscience, vol. 56, no. 5, pp. 530-541, 2015. doi : 10.1016/j.myc.2015.05.00.en_ZA
dc.subjectFungal diagnosticsen_ZA
dc.subjectIntergenic spacer region one (IGS-1)en_ZA
dc.subjectRoot roten_ZA
dc.subjectTranscription elongation factor one alpha (TEF-1α) geneen_ZA
dc.titlePhylogenetic relationships among biological species of Armillaria from Chinaen_ZA
dc.typePostprint Articleen_ZA

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