Using the multivariate Hawkes process to study interactions between multiple species from camera trap data

dc.contributor.authorNicvert, Lisa
dc.contributor.authorDonnet, Sophie
dc.contributor.authorKeith, Mark
dc.contributor.authorPeel, Mike
dc.contributor.authorSomers, Michael J.
dc.contributor.authorSwanepoel, Lourens H.
dc.contributor.authorVenter, Jan A.
dc.contributor.authorFritz, Herve
dc.contributor.authorDray, Stephane
dc.date.accessioned2024-06-11T04:41:01Z
dc.date.available2024-06-11T04:41:01Z
dc.date.issued2024-05
dc.descriptionDATA AVAILABILITY STATEMENT : Data and code (Nicvert et al., 2023) are available on Figshare at https://doi.org/10.6084/m9.figshare.24552157.v5.en_US
dc.description.abstractInterspecific interactions can influence species' activity and movement patterns. In particular, species may avoid or attract each other through reactive responses in space and/or time. However, data and methods to study such reactive interactions have remained scarce and were generally limited to two interacting species. At this time, the deployment of camera traps opens new opportunities but adapted statistical techniques are still required to analyze interaction patterns with such data. We present the multivariate Hawkes process (MHP) and show how it can be used to analyze interactions between several species using camera trap data. Hawkes processes use flexible pairwise interaction functions, allowing us to consider asymmetries and variations over time when depicting reactive temporal interactions. After describing the theoretical foundations of the MHP, we outline how its framework can be used to study interspecific interactions with camera trap data. We design a simulation study to evaluate the performance of the MHP and of another existing method to infer interactions from camera trap-like data. We also use the MHP to infer reactive interactions from real camera trap data for five species from South African savannas (impala Aepyceros melampus, greater kudu Tragelaphus strepsiceros, lion Panthera leo, blue wildebeest Connochaetes taurinus and Burchell's zebra Equus quagga burchelli). The simulation study shows that the MHP can be used as a tool to benchmark other methods of interspecific interaction inference and that this model can reliably infer interactions when enough data are considered. The analysis of real data highlights evidence of predator avoidance by prey and herbivore–herbivore attraction. Lastly, we present the advantages and limits of the MHP and discuss how it can be improved to infer attraction/avoidance patterns more reliably. As camera traps are increasingly used, the multivariate Hawkes process provides a promising framework to decipher the complexity of interactions structuring ecological communities.en_US
dc.description.departmentMammal Research Instituteen_US
dc.description.departmentZoology and Entomologyen_US
dc.description.librarianhj2024en_US
dc.description.sdgSDG-15:Life on landen_US
dc.description.sponsorshipThe French National Research Agency ANR (project EcoNet).en_US
dc.description.urihttps://onlinelibrary.wiley.com/r/ecyen_US
dc.identifier.citationNicvert, Lisa, Sophie Donnet, Mark Keith, Mike Peel, Michael J. Somers, Lourens H. Swanepoel, Jan Venter, Hervé Fritz, and Stéphane Dray. 2024. “Using the Multivariate Hawkes Process to Study Interactions between Multiple Species from Camera Trap Data.” Ecology 105(4): e4237. https://doi.org/10.1002/ecy.4237.en_US
dc.identifier.issn0012-9658 (print)
dc.identifier.issn1939-9170 (online)
dc.identifier.other10.1002/ecy.4237
dc.identifier.urihttp://hdl.handle.net/2263/96384
dc.language.isoenen_US
dc.publisherWileyen_US
dc.rights© 2024 The Ecological Society of America.en_US
dc.subjectAfrican savannaen_US
dc.subjectCamera trapen_US
dc.subjectInteraction networken_US
dc.subjectInterspecific interactionsen_US
dc.subjectMultivariate Hawkes processen_US
dc.subjectReactive responseen_US
dc.subjectSnapshot Safarien_US
dc.subjectSpatio-temporal interactionsen_US
dc.subjectSDG-15: Life on landen_US
dc.titleUsing the multivariate Hawkes process to study interactions between multiple species from camera trap dataen_US
dc.typePostprint Articleen_US

Files

Original bundle

Now showing 1 - 2 of 2
Loading...
Thumbnail Image
Name:
Nicvert_Using_2024.pdf
Size:
10.03 MB
Format:
Adobe Portable Document Format
Description:
Postprint Article
Loading...
Thumbnail Image
Name:
Nicvert_UsingAppenS1_2024.pdf
Size:
5.45 MB
Format:
Adobe Portable Document Format
Description:
Appendix S1

License bundle

Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
license.txt
Size:
1.71 KB
Format:
Item-specific license agreed upon to submission
Description: