SWAPDT : a method for short-time withering assessment of probability for drought tolerance in Camellia sinensis validated by targeted metabolomics

dc.contributor.authorNyarukowa, Christopher
dc.contributor.authorKoech, Robert K.
dc.contributor.authorLoots, Mattheus Theodor
dc.contributor.authorApostolides, Zeno
dc.contributor.emailzeno.apostolides@up.ac.zaen_ZA
dc.date.accessioned2016-06-22T06:05:41Z
dc.date.issued2016-07
dc.description.abstractClimate change is causing droughts affecting crop production on a global scale. Classical breeding and selection strategies for drought-tolerant cultivars will help prevent crop losses. Plant breeders, for all crops, need a simple and reliable method to identify drought-tolerant cultivars, but such a method is missing. Plant metabolism is often disrupted by abiotic stress conditions. To survive drought, plants reconfigure their metabolic pathways. Studies have documented the importance of metabolic regulation, i.e. osmolyte accumulation such as polyols and sugars (mannitol, sorbitol); amino acids (proline) during drought. This study identified and quantified metabolites in drought tolerant and drought susceptible Camellia sinensis cultivars under wet and drought stress conditions. For analyses, GC-MS and LC-MS were employed for metabolomics analysis. %RWC results show how the two drought tolerant and two drought susceptible cultivars differed significantly (p ≤ 0.05) from one another; the drought susceptible exhibited rapid water loss compared to the drought tolerant. There was a significant variation (p < 0.05) in metabolite content (amino acid, sugars) between drought tolerant and drought susceptible tea cultivars after short-time withering conditions. These metabolite changes were similar to those seen in other plant species under drought conditions, thus validating this method. The Short-time Withering Assessment of Probability for Drought Tolerance (SWAPDT) method presented here provides an easy method to identify drought tolerant tea cultivars that will mitigate the effects of drought due to climate change on crop losses.en_ZA
dc.description.departmentBiochemistryen_ZA
dc.description.departmentStatisticsen_ZA
dc.description.embargo2017-07-31
dc.description.librarianhb2016en_ZA
dc.description.sponsorshipThe financial support to conduct this research, and study grants for CN and RK from James Finlay (Kenya) Ltd, George Williamson (Kenya) Ltd, Sotik Tea Company (Kenya) Ltd, Mcleod Russell (Uganda) Ltd, and the Tea Research Institute of Kenya. The C. sinensis cultivars used in this study were provided by the Tea Research Foundation of Central Africa (Malawi) and the Tea Research Institute of Kenya. Supplementary funding was provided by, the Technology and Human Resources for Industry Programme (THRIP), an initiative of the Department of Trade and Industries of South Africa (dti), the National Research Foundation (NRF) of South Africa, and the University of Pretoria (South Africa).en_ZA
dc.description.urihttp://www.elsevier.com/locate/jplphen_ZA
dc.identifier.citationNyarukowa, C, Koech, R, Loots, T & Apostolides, Z 2016, 'SWAPDT : a method for short-time withering assessment of probability for drought tolerance in Camellia sinensis validated by targeted metabolomics', Journal of Plant Physiology, vol. 98, pp. 39-48.en_ZA
dc.identifier.issn0176-1617 (print)
dc.identifier.issn1618-1328 (online)
dc.identifier.other10.1016/j.jplph.2016.04.004
dc.identifier.urihttp://hdl.handle.net/2263/53292
dc.language.isoenen_ZA
dc.publisherElsevieren_ZA
dc.rights© 2016 Published by Elsevier GmbH. All rights reserved. Notice : this is the author’s version of a work that was accepted for publication in Journal of Plant Physiology. Changes resulting from the publishing process, such as peer review, editing, corrections, structural formatting, and other quality control mechanisms may not be reflected in this document. Changes may have been made to this work since it was submitted for publication. A definitive version was subsequently published in Journal of Plant Physiology, vol. 198, pp. 39-48, 2016. doi : 10.1016/j.jplph.2016.04.004.en_ZA
dc.subjectAbiotic stressen_ZA
dc.subjectAmino acid (AA)en_ZA
dc.subjectCamellia sinensisen_ZA
dc.subjectCarbohydratesen_ZA
dc.subjectDrought toleranceen_ZA
dc.subjectGC-MSen_ZA
dc.subjectLC-MSen_ZA
dc.subjectMetabolite profilingen_ZA
dc.subjectShort-time witheringen_ZA
dc.subjectTargeted metabolomicsen_ZA
dc.titleSWAPDT : a method for short-time withering assessment of probability for drought tolerance in Camellia sinensis validated by targeted metabolomicsen_ZA
dc.typePostprint Articleen_ZA

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