Reverse transcription recombinase polymerase amplification assay for rapid detection of canine associated rabies virus in Africa

dc.contributor.authorCoertse, Jessica
dc.contributor.authorWeyer, Jacqueline
dc.contributor.authorNel, Louis Hendrik
dc.contributor.authorMarkotter, Wanda
dc.date.accessioned2020-08-24T08:52:45Z
dc.date.available2020-08-24T08:52:45Z
dc.date.issued2019-07
dc.descriptionSupporting information: S1 Table. Details of rabies virus sequences used for primer and probe design for the RT-RPA assay.en_ZA
dc.descriptionS2 Table. Evaluation of the mismatches between the RT-RPA primer and probe set binding regions to rabies-related lyssaviruses.en_ZA
dc.description.abstractRabies is a neglected disease mostly affecting the developing world. Accurate and reliable diagnostic and surveillance data forms the foundation for the formulation and monitoring of control strategies. Although various sensitive and specific tests are available for detection of rabies virus, implementation of these tests in low-resource settings are challenging and remains limited. In this study, we describe the developed of a reverse transcription recombinase polymerase amplification assay for the detection of rabies virus. The analytical sensitivity of this assay was determined to be 562 RNA copies and was performed in 20 minutes. The diagnostic sensitivity of the RT-RPA was 100% for detection of rabies virus in field samples. In conclusion, the RT-RPA assay allowed for very quick and sensitive detection of rabies virus and could be adapted for use in low-source settings.en_ZA
dc.description.departmentBiochemistryen_ZA
dc.description.departmentGeneticsen_ZA
dc.description.departmentMedical Virologyen_ZA
dc.description.departmentMicrobiology and Plant Pathologyen_ZA
dc.description.librarianpm2020en_ZA
dc.description.sponsorshipThe South African Research Chair initiative of the Department of Science and Technology and National Research Foundation of South Africa and the Poliomyelitis Research Foundation.en_ZA
dc.description.urihttp://www.plosone.orgen_ZA
dc.identifier.citationCoertse J, Weyer J, Nel LH, Markotter W (2019) Reverse transcription recombinase polymerase amplification assay for rapid detection of canine associated rabies virus in Africa. PLoS ONE 14(7): e0219292. https://doi.org/10.1371/journal.pone.0219292.en_ZA
dc.identifier.issn1932-6203 (online)
dc.identifier.other10.1371/ journal.pone.0219292
dc.identifier.urihttp://hdl.handle.net/2263/75867
dc.language.isoenen_ZA
dc.publisherPublic Library of Scienceen_ZA
dc.rights© 2019 Coertse et al. This is an open access article distributed under the terms of the Creative Commons Attribution License.en_ZA
dc.subjectRabiesen_ZA
dc.subjectReverse transcription recombinase polymerase amplification (RT-RPA)en_ZA
dc.subjectAfricaen_ZA
dc.titleReverse transcription recombinase polymerase amplification assay for rapid detection of canine associated rabies virus in Africaen_ZA
dc.typeArticleen_ZA

Files

Original bundle

Now showing 1 - 3 of 3
Loading...
Thumbnail Image
Name:
Coertse_Reverse_2019.pdf
Size:
1.85 MB
Format:
Adobe Portable Document Format
Description:
Article
Loading...
Thumbnail Image
Name:
Coertse_ReverseTabS1_2019.pdf
Size:
82.18 KB
Format:
Adobe Portable Document Format
Description:
Table S1
Loading...
Thumbnail Image
Name:
Coertse_ReverseTabS2_2019.pdf
Size:
67.47 KB
Format:
Adobe Portable Document Format
Description:
Table S2

License bundle

Now showing 1 - 1 of 1
Loading...
Thumbnail Image
Name:
license.txt
Size:
1.75 KB
Format:
Item-specific license agreed upon to submission
Description: