Mitochondrial genome sequence comparisons indicate that the elephant louse Haematomyzus elephantis (Piaget, 1869) contains cryptic species

dc.contributor.authorKelly, Sarah
dc.contributor.authorDong, Yalun
dc.contributor.authorWang, Wei
dc.contributor.authorMatthee, Sonja
dc.contributor.authorWentzel, Jeanette Maria
dc.contributor.authorDurden, Lance A.
dc.contributor.authorShao, Renfu
dc.date.accessioned2024-02-20T09:34:59Z
dc.date.available2024-02-20T09:34:59Z
dc.date.issued2024-03
dc.descriptionDATA AVAILABILITY STATEMENT : Annotated mitochondrial genome sequences of the African savanna elephant lice produced in the current study are available in GenBank (accession numbers OQ834926-OQ834934; https://www.ncbi.nlm.nih.gov/genbank/); raw Illumina sequence data are available in the NCBI Sequence Read Archive (SRA) database (BioProject accession number PRJNA1021748). Genomic sequence reads of an Asian elephant louse (SRR5308122) and transcriptomic sequence reads of an Asian elephant louse (SRR2051491) are available in the SRA database (https://www.ncbi.nlm.nih.gov/sra).en_US
dc.descriptionSUPPLEMENTARY MATERIAL S1. PCR primers used to amplify the mitochondrial genes or minichromosomes of the African savanna elephant louse.en_US
dc.descriptionSUPPLEMENTARY MATERIAL S2. Mitochondrial cox1 gene sequence divergence between closely related congeneric species of parasitic lice.en_US
dc.descriptionSUPPLEMENTARY MATERIAL S3. The fully sequenced S2-R-nad4L-M-G-nad3 mitochondrial minichromosome of African savanna elephant louse (RS460). trnG, trnM, trnR and trnS2 are tRNA genes for amino acids glycine, methionine, arginine and serine respectively. nad3 and nad4L are for NADH dehydrogenase subunits 3 and 4L. SKnad4LFO2 and SKnad4LRO2 are the primer pair that amplifies the entire S2-R-nad4L-M-G-nad3 minichromosome.en_US
dc.descriptionSUPPLEMENTARY MATERIAL S4. Mitochondrial gene sequence divergence between African (RS460) and Asian elephant lice (B1567, SRR5308122.en_US
dc.descriptionSUPPLEMENTARY MATERIAL S5. Mitochondrial gene sequence divergence among Asian elephant lice (B1567, SRR5308122 and SRR2051491).en_US
dc.descriptionSUPPLEMENTARY MATERIAL S6. Mitochondrial cox1 gene and genome sequence divergence between African savanna elephant (Loxodonta africana, GenBank accession number NC_000934) and Asian elephant (Elephas maximus, NC_005129).en_US
dc.description.abstractThe parvorder Rhynchopthirina contains three currently recognised species of lice that parasitize elephants (both African savanna elephant Loxodonta africana and Asian elephant Elephas maximus), desert warthogs (Phacochoerus aethiopicus) and Red River hogs (Potamochoerus porcus), respectively. The Asian elephant lice and the African savanna elephant lice are currently treated as the same species, Haematomyzus elephantis (Piaget, 1869), based on morphology despite the fact that their hosts diverged 8.4 million years ago. In the current study, we sequenced 23 mitochondrial (mt) genes of African savanna elephant lice collected in South Africa and analysed the sequence divergence between African savanna elephant lice and previously sequenced Asian elephant lice. Sequence comparisons revealed >23% divergence for the 23 mt genes as a whole and ~17% divergence for cox1 gene between African savanna and Asian elephant lice, which were far higher than the divergence expected within a species. Furthermore, the mt gene sequence divergences between these lice are 3.76–4.6 times higher than that between their hosts, the African savanna and Asian elephants, which are expected for the co-divergence and co-evolution between lice and their elephant hosts. We conclude that (1) H. elephantis (Piaget, 1869) contains cryptic species and (2) African savanna and Asian elephant lice are different species genetically that may have co-diverged and co-evolved with their hosts.en_US
dc.description.departmentCentre for Veterinary Wildlife Studiesen_US
dc.description.departmentVeterinary Tropical Diseasesen_US
dc.description.librarianhj2024en_US
dc.description.sdgSDG-03:Good heatlh and well-beingen_US
dc.description.sponsorshipUniversity of the Sunshine Coast.en_US
dc.description.sponsorshipOpen access publishing facilitated by University of the Sunshine Coast, as part of the Wiley - University of the Sunshine Coast agreement via the Council of Australian University Librarians.en_US
dc.description.urihttp://wileyonlinelibrary.com/journal/mveen_US
dc.identifier.citationKelly, S., Dong, Y., Wang, W., Matthee, S., Wentzel, J.M., Durden, L.A. et al. (2024) Mitochondrial genome sequence comparisons indicate that the elephant louse Haematomyzus elephantis (Piaget, 1869) contains cryptic species. Medical and Veterinary Entomology, 38(1), 112–117. Available from: https://doi.org/10.1111/mve.12699.en_US
dc.identifier.issn0269-283X (print)
dc.identifier.issn1365-2915 (online)
dc.identifier.other10.1111/mve.12699
dc.identifier.urihttp://hdl.handle.net/2263/94748
dc.language.isoenen_US
dc.publisherWileyen_US
dc.rights© 2023 The Authors. Medical and Veterinary Entomology published by John Wiley & Sons Ltd on behalf of Royal Entomological Society. This is an open access article under the terms of the Creative Commons Attribution-NonCommercial License.en_US
dc.subjectCo-divergenceen_US
dc.subjectCo-evolutionen_US
dc.subjectDeoxyribonucleic acid (DNA)en_US
dc.subjectDNA barcodeen_US
dc.subjectEctoparasitesen_US
dc.subjectElephant liceen_US
dc.subjectHaematomyzus elephantisen_US
dc.subjectMitochondrial genomeen_US
dc.subjectRhynchopthirinaen_US
dc.subjectAfrican elephant (Loxodonta africana)en_US
dc.subjectAsian elephant (Elephas maximus)en_US
dc.subjectDesert warthog (Phacochoerus aethiopicus)en_US
dc.subjectRed River hog (Potamochoerus porcus)en_US
dc.subjectSDG-03: Good health and well-beingen_US
dc.titleMitochondrial genome sequence comparisons indicate that the elephant louse Haematomyzus elephantis (Piaget, 1869) contains cryptic speciesen_US
dc.typeArticleen_US

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