A maximum entropy species distribution model to estimate the distribution of bushpigs on Madagascar and its implications for African swine fever

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dc.contributor.author Dıaz-Cao, Jose Manuel
dc.contributor.author Grossmann, Narjara
dc.contributor.author Goodman, Steven M.
dc.contributor.author Bosch, Jaime
dc.contributor.author Guis, Helene
dc.contributor.author Rasamoelina, Miatrana
dc.contributor.author Rakotoarivony, Rianja
dc.contributor.author Jori, Ferran J.
dc.contributor.author Martınez-Lopez, Beatriz
dc.date.accessioned 2024-01-10T12:27:37Z
dc.date.available 2024-01-10T12:27:37Z
dc.date.issued 2023-02-28
dc.description DATA AVAILABILITY : The data supporting the findings of this study are available from the corresponding author upon request. en_US
dc.description SUPPLEMENTARY MATERIAL : SUPPLEMENTARY FIGURE 1: Spatial and temporal distribution of the total number of observations of bushpigs originally gathered (n = 206, left) and of the observations included in the ecological niche model (n = 83, right) after correction for pseudoreplication. SUPPLEMENTARY FIGURE 2: The Spearman’s correlation matrix of the 36 environmental variables selected for the study. SUPPLEMENTARY FIGURE 3: The map of the density of pigs (no. of heads/km2) in Madagascar. SUPPLEMENTARY FIGURE 4: Variation in the repetition of the MaxEnt analysis resampling different presence points: (a) the final model presented in the study and used as a reference; (b) the map of the average absolute difference in the predicted output between each of the 1,000 analyses and the reference map; and (c) maximum, 95th percentile, and median of the variation (in %) from the reference map for each of the 1,000 iterations. SUPPLEMENTARY TABLE 1: Variables considered for the ecological niche model and source. SUPPLEMENTARY CODE 1: Example of an R code to correct for pseudoreplication. en_US
dc.description.abstract Bushpigs (Potamochoerus larvatus) play a major role in the socio-ecosystem of Madagascar, particularly in rural areas. They are largely hunted by rural populations as a major source of income and protein. They can also represent a potential source of pathogens for domestic animals and people. For example, it is hypothesized that bushpigs might compromise African swine fever (ASF) eradication programs by sporadically transmitting the virus to domestic pigs. However, available knowledge on the distribution of bushpigs in Madagascar is limited. In this study, we estimated the distribution of bushpigs on Madagascar using a species distribution model (SDM). We retrieved 206 sightings of bushpigs in Madagascar during 1990–2016 and predicted the distribution by using 37 climatic, geographic, and agricultural/human variables related to the presence of bushpigs and running a presence-background maximum entropy SDM. Our model identified three main areas with a high suitability for bushpigs: in the north, central-western, and east of the island (AUC = 0.84). The main contributors to the model were the vegetation index (51.3%), percentage of land covered by trees (17.6%), and annual averaged monthly precipitation (12.6%). In addition, we identified areas in central Madagascar with a high density of domestic pigs and a high suitability score for bushpigs. These results may help to identify bushpig areas at the interface with domestic pigs to assess the risk of pathogen transmission and to design ecological assessments, wildlife management studies, or targeted surveillance and research studies related to many bushpig-borne pathogens, such as ASF, which is an endemic problem in the country, as well as zoonotic diseases such as cysticercosis and hepatitis E. Our approach could also be extrapolated to other species of wild swine in other countries. en_US
dc.description.department Zoology and Entomology en_US
dc.description.librarian am2023 en_US
dc.description.sdg None en_US
dc.description.sponsorship The Ecology and Evolution of Infectious Diseases Program funded by the USDA National Institute of Food and Agriculture. en_US
dc.description.uri https://www.hindawi.com/journals/tbed en_US
dc.identifier.citation Dıaz-Cao, J.M., Grossman, N., Goodman, S.M. et al. 2023, 'A maximum entropy species distribution model to estimate the distribution of bushpigs on Madagascar and its implications for African swine fever', Transboundary and Emerging Diseases, vol. 2023, art. 7976252, pp. 1-10. https://DOI.org/10.1155/2023/7976252. en_US
dc.identifier.issn 1865-1674 (print)
dc.identifier.issn 1865-1682 (online)
dc.identifier.other 10.1155/2023/7976252
dc.identifier.uri http://hdl.handle.net/2263/93901
dc.language.iso en en_US
dc.publisher Hindawi en_US
dc.rights © 2023 Jose Manuel Dıaz-Cao et al. This is an open access article distributed under the Creative Commons Attribution License. en_US
dc.subject Rural populations en_US
dc.subject Madagascar en_US
dc.subject Bushpigs (Potamochoerus larvatus) en_US
dc.subject African swine fever (ASF) en_US
dc.subject Species distribution model (SDM) en_US
dc.title A maximum entropy species distribution model to estimate the distribution of bushpigs on Madagascar and its implications for African swine fever en_US
dc.type Article en_US


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