dc.contributor.author |
Wilson, A.M. (Andi)
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|
dc.contributor.author |
Wingfield, Michael J.
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|
dc.contributor.author |
Wingfield, Brenda D.
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dc.date.accessioned |
2023-11-13T10:07:03Z |
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dc.date.available |
2023-11-13T10:07:03Z |
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dc.date.issued |
2023-05-13 |
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dc.description |
ADDITIONAL FILE 1 : FIG S1. RNA mapping to confirm the single nucleotide deletion in the H. moniliformis MAT1-2-7. FIG. S2. The structure of the Huntiella a-factor pheromone proteins and the sequence of the putative mature repeats. FIG. S3. An alignment of the a1 a-factor pheromone factor genes from all eight Huntiella species considered in this study. FIG. S4. RNA mapping to confirm in frame stop codons in the a1 and a6 a-factor pheromone factor genes from the unisexual H. moniliformis. FIG. S5. An alignment of the a3 a-factor pheromone from all eight Huntiella species considered in this study. FIG. S6. RNA mapping to determine expression of the multiple a-factor pheromone genes from H. abstrusa. FIG. S7. RNA mapping to determine expression of the multiple a-factor pheromone genes from H. omanensis. FIG. S8. RNA mapping to determine expression of the multiple a-factor pheromone genes from H. moniliformis. FIG. S9. The structure of the Huntiella α-factor pheromones from the various Huntiella species along with the sequences of the putative mature repeats. |
en_US |
dc.description |
ADDITIONAL FILE 2 : SUPPLEMENTARY FILE 1. All of the scripts and parameters used for the genome assemblies produced in this study. |
en_US |
dc.description |
ADDITIONAL FILE 3 : SUPPLEMENTARY FILE 2. The gene alignments and all parameters for the phylogenetic analysis conducted in this study. |
en_US |
dc.description |
ADDITIONAL FILE 4 : TABLE S1. Genome sequencing and assembly statistics. TABLE S2. Comparisons of Huntiella genome statistics. TABLE S3. Gene present at the second a-factor pheromone locus. |
en_US |
dc.description |
DATA AVAILABILITY : All data used and generated in this study are available either in the Genome or Sequence Read Archive (SRA) databases of the NCBI or in the Supplementary Data associated with this manuscript. The accession numbers of the genomes are as follows: H. abstrusa (JAJNMT000000000.1), H. omanensis (JSUI00000000.1), H. bhutanensis (MJMS00000000.1), H. decipiens (NETU00000000.1), H. savannae (LCZG00000000.1), H. moniliformis (JMSH00000000.1), H. fecunda (JAPHQJ000000000.1) and H. tyalla (JAPHQI000000000.1). The BioProject numbers of the RNAseq raw reads are as follows: H. abstrusa (PRJNA894346), H. omanensis (PRJNA385659) and H. moniliformis (PRJNA385659). |
en_US |
dc.description.abstract |
BACKGROUND : Huntiella resides in the Ceratocystidaceae, a family of fungi that accommodates important plant pathogens and insect-associated saprotrophs. Species in the genus have either heterothallic or unisexual (a form of homothallism) mating systems, providing an opportunity to investigate the genetic mechanisms that enable transitions between reproductive strategies in related species. Two newly sequenced Huntiella genomes are introduced in this study and comparative genomics and transcriptomics tools are used to investigate the differences between heterothallism and unisexuality across the genus.
RESULTS : Heterothallic species harbored up to seven copies of the a-factor pheromone, each of which possessed numerous mature peptide repeats. In comparison, unisexual Huntiella species had only two or three copies of this gene, each with fewer repeats. Similarly, while the heterothallic species expressed up to 12 copies of the mature α-factor pheromone, unisexual species had up to six copies. These significant differences imply that unisexual Huntiella species do not rely on a mating partner recognition system in the same way that heterothallic fungi do.
CONCLUSION : While it is suspected that mating type-independent pheromone expression is the mechanism allowing for unisexual reproduction in Huntiella species, our results suggest that the transition to unisexuality may also have been associated with changes in the genes governing the pheromone pathway. While these results are specifically related to Huntiella, they provide clues leading to a better understanding of sexual reproduction and the fluidity of mating strategies in fungi more broadly. |
en_US |
dc.description.department |
Biochemistry |
en_US |
dc.description.department |
Forestry and Agricultural Biotechnology Institute (FABI) |
en_US |
dc.description.department |
Genetics |
en_US |
dc.description.sponsorship |
DSI/NRF Scarce Skills Postdoctoral Fellowship; DSI/NRF SARChI chair in Fungal Genomics and University of Pretoria. |
en_US |
dc.description.uri |
https://bmcgenomics.biomedcentral.com |
en_US |
dc.identifier.citation |
Wilson, A.M., Wingfield, M.J. & Wingfield, B.D. Structure and number of mating pheromone genes is closely linked to sexual reproductive strategy in Huntiella. BMC Genomics 24, 261 (2023). https://doi.org/10.1186/s12864-023-09355-9. |
en_US |
dc.identifier.issn |
1471-2164 (online) |
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dc.identifier.other |
10.1186/s12864-023-09355-9 |
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dc.identifier.uri |
http://hdl.handle.net/2263/93264 |
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dc.language.iso |
en |
en_US |
dc.publisher |
BMC |
en_US |
dc.rights |
© The Author(s) 2023. Open Access. This article is licensed under a Creative Commons Attribution 4.0 International License. |
en_US |
dc.subject |
Sexual reproduction |
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dc.subject |
Homothallism |
en_US |
dc.subject |
Unisexuality |
en_US |
dc.subject |
Heterothallism |
en_US |
dc.subject |
Mating pheromones |
en_US |
dc.subject |
Huntiella |
en_US |
dc.subject |
Sexual strategy |
en_US |
dc.subject |
Mating strategy |
en_US |
dc.subject |
SDG-15: Life on land |
en_US |
dc.title |
Structure and number of mating pheromone genes is closely linked to sexual reproductive strategy in Huntiella |
en_US |
dc.type |
Article |
en_US |