Development of a real time polymerase chain reaction assay for equine encephalosis virus
Loading...
Date
Authors
Rathogwa, Ntungufhadzeni Maclaughlin
Quan, Melvyn
Smit, J.Q.
Lourens C.
Guthrie, Alan John
Van Vuuren, Moritz
Journal Title
Journal ISSN
Volume Title
Publisher
Elsevier
Abstract
Equine encephalosis virus (EEV) is the cause of equine encephalosis. The disease is similar to mild forms
of African horse sickness (AHS) and the two diseases are easily confused. Laboratory identification and
serotyping of EEV is based on viral isolation in BHK-21 cells and a viral plaque inhibition neutralisation
test. These procedures are time-consuming and therefore a more rapid diagnostic assay for EEV that can
distinguish EEV from African horse sickness virus (AHSV) infections was developed.
The S7 (VP7) gene from 38 EEV isolates representing all seven serotypes was amplified and sequenced.
A conserved region at the 5 end of the gene was identified and used to design group-specific EEV primers
and a TaqMan® MGBTM hydrolysis probe.
The efficiency of the EEV real-time RT-PCR assay was 81%. The assay was specific, as it did not detect
any of the nine serotypes of AHSV, nor 24 serotypes of bluetongue virus (BTV) and sensitive, with a 95%
limit of detection of 102.9 TCID50/ml blood (95% confidence interval: 102.7 to 103.3).
The real-time format was selected because of its convenience, sensitivity and ability to produce results
rapidly.
Description
Keywords
Real time RT-PCR, Diagnostic assay, Group-specific, VP7, Equine encephalosis virus, African horse sickness, African horse sickness virus, EEV, AHS, AHSV
Sustainable Development Goals
Citation
Rathogwa NM, Quan M, Smit JQ, Lourens C, Guthrie AJ & Van Vuuren M 2014, 'Development of a real time polymerase chain reaction assay for equine encephalosis virus', Journal of Virological Methods, vol. 195, pp. 205-210.