Glyphosate may cause injury to non-target plants. The first detectable symptom after glyphosate treatment is the growth inhibition, followed by noticeable yellowing (chlorosis) of the treated tissue. Five to ten days after the treatment, the chlorosis turns into necrosis and the plants begin to die. Greenhouse research was conducted in 2007 to investigate the response of glyphosate resistant (GR) soybeans PAN 520 line and non-glyphosate resistant EGRET line of soybeans to glyphosate trimesium sulphosate and to evaluate soybeans injury to help in weed resistance detection. The methods used to detect changes were dose response test, HPLC measurement based on glyphosate induced accumulation of shikimate, and morpho-anatomical changes (light and electron microscopy). Damaged chloroplasts are a clear indication of a glyphosate injury. If the injury rating is related to increased shikimate levels, there is greater certainty that differences among biotypes are due to glyphosate tolerance.