Browsing Natural and Agricultural Sciences by UP Author "Ramond, Jean-Baptiste"

Browsing Natural and Agricultural Sciences by UP Author "Ramond, Jean-Baptiste"

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  • Rifkin, Riaan F.; Potgieter, Marnie; Ramond, Jean-Baptiste; Cowan, Don A. (John Wiley & Sons Ltd., 2017-12)
    The recent discovery that malignant neoplastic lesions date back nearly 2 million years ago not only highlights the antiquity of cancer in the human lineage, but also provides remarkable insight into ancestral hominin ...
  • Van der Walt, Andries Johannes; Van Goethem, Marc W.; Ramond, Jean-Baptiste; Makhalanyane, Thulani Peter; Reva, Oleg N.; Cowan, Don A. (BioMed Central, 2017-07-10)
    BACKGROUND : Metagenomics allows unprecedented access to uncultured environmental microorganisms. The analysis of metagenomic sequences facilitates gene prediction and annotation, and enables the assembly of draft genomes, ...
  • Ramond, Jean-Baptiste; Welz, Pamela J.; Tuffin, Marla I.; Burton, Stephanie G.; Cowan, Don A. (Wiley-Blackwell, 2013)
    AIMS : To assess the impact of winery wastewater (WW) on biological sand filter (BSF) bacterial community structures, and to evaluate whether BSFs can constitute alternative and valuable treatment- processes to remediate ...
  • Welz, Pamela J.; Ramond, Jean-Baptiste; Braun, Lorenz; Vikram, Surendra; Le Roes-Hill, Marilize (Elsevier, 2018-02)
    Heterotrophic bacteria proliferate in organic-rich environments and systems containing sufficient essential nutrients. Nitrogen, phosphorus and potassium are the nutrients required in the highest concentrations. The ratio ...
  • Archer, Stephen D.J.; Lee, Kevin C.; Caruso, Tancredi; Alcami, Antonio; Araya, Jonathan G.; Cary, S. Craig; Cowan, Don A.; Etchebehere, Claudia; Gantsetseg, Batdelger; Gomez-Silva, Benito; Hartery, Sean; Hogg, Ian D.; Kansour, Mayada K.; Lawrence, Timothy; Lee, Charles K.; Lee, Patrick K.H.; Leopold, Matthias; Leung, Marcus H.Y.; Maki, Teruya; McKay, Christopher P.; Al Mailem, Dina M.; Ramond, Jean-Baptiste; Rastrojo, Alberto; Santl-Temkiv, Tina; Suns, Henry J.; Tong, Xinzhao; Vandenbrink, Bryan; Warren-Rhodes, Kimberley A.; Pointing, Stephen B. (Elsevier, 2023-05)
    The dispersion of microorganisms through the atmosphere is a continual and essential process that underpins biogeography and ecosystem development and function. Despite the ubiquity of atmospheric microorganisms globally, ...
  • Gunnigle, Eoin; Frossard, Aline; Ramond, Jean-Baptiste; Guerrero, Leandro D.; Seely, Mary; Cowan, Don A. (Nature Publishing Group, 2017-01-10)
    Microbes in hot desert soil partake in core ecosystem processes e.g., biogeochemical cycling of carbon. Nevertheless, there is still a fundamental lack of insights regarding short-term (i.e., over a 24-hour [diel] cycle) ...
  • Truter, Mia; Koopman, Jessica E.; Jordaan, Karen; Tsamkxao, Leon Oma; Cowan, Don A.; Underdown, Simon J.; Ramond, Jean-Baptiste; Rifkin, R.F. (Riaan) (Cell Press, 2024-02)
    We investigate the bacterial and fungal composition and functionality of the Ju|’hoansi intestinal microbiome (IM). The Juǀʼhoansi are a hunter-gatherer community residing in northeastern Namibia. They formerly subsisted ...
  • Gunnigle, Eoin; Ramond, Jean-Baptiste; Guerrero, Leandro D.; Makhalanyane, Thulani Peter; Cowan, Don A. (Oxford University Press, 2015-04)
    Hypoliths are microbially colonized translucent rocks that represent a key refuge niche in extreme arid environments such as the Antarctic Dry Valleys. These cryptic microbial assemblages are crucial as they mediate ...
  • Ramond, Jean-Baptiste; Lako, Joseph D.W.; Stafford, W.H.L. (William); Tuffin, Marla I.; Cowan, Don A. (Wiley, 2015-08)
    Ammonia-oxidizing bacteria (AOB) are essential in the biogeochemical cycling of nitrogen as they catalyze the rate-limiting oxidation of ammonia into nitrite. Since their first isolation in the late 19th century, ...
  • Cowan, Don A.; Cary, S. Craig; DiRuggiero, Jocelyne; Eckardt, Frank; Ferrari, Belinda; Hopkins, David; Lebre, Pedro H.; Maggs‑Kolling, Gillian; Pointing, Stephen B.; Ramond, Jean-Baptiste; Tribbia, Dana; Warren-Rhodes, Kimberley (MDPI, 2023-06-27)
    Water availability is the dominant driver of microbial community structure and function in desert soils. However, these habitats typically only receive very infrequent large-scale water inputs (e.g., from precipitation ...
  • Franzini, Philippa Z.N.; Ramond, Jean-Baptiste; Scholtz, Clarke H.; Sole, Catherine L.; Ronca, Sandra; Cowan, Don A. (Public Library of Science, 2016-08-17)
    Micro-organisms inhabiting animal guts benefit from a protected and nutrient-rich environment while assisting the host with digestion and nutrition. In this study we compare, for the first time, the bacterial and fungal ...
  • Maropola, Mapula Kgomotso Annah; Ramond, Jean-Baptiste; Trindade, Marla Iris (Elsevier, 2015-05)
    Culture-independent studies rely on the quantity and quality of the extracted environmental metagenomic DNA (mDNA). To fully access the plant tissue microbiome, the extracted plant mDNA should allow optimal PCR applications ...
  • Gombeer, S.; Ramond, Jean-Baptiste; Eckardt, Frank; Seely, Mary; Cowan, Don A. (Wiley, 2015-09)
    Notwithstanding, the severe environmental conditions, deserts harbour a high diversity of adapted micro-organisms. In such oligotrophic environments, soil physicochemical characteristics play an important role in shaping ...
  • Cowan, Don A.; Ramond, Jean-Baptiste; Makhalanyane, Thulani Peter; De Maayer, Pieter (Elsevier, 2015-06)
    Whether they are exposed to extremes of heat, cold, or buried deep beneath the Earth‟s surface, microorganisms have an uncanny ability to survive under these conditions. This ability to survive has fascinated scientists ...
  • Zablocki, Olivier; Adriaenssens, Evelien M.; Frossard, Aline; Seely, Mary; Ramond, Jean-Baptiste; Cowan, Don A. (American Society for Microbiology, 2017-01-12)
    The Namib Desert in southwest Africa is hyperarid and composed of distinct microbial communities affected by a longitudinal aridity gradient. Here, we report four soil metaviromes from the Namib Desert, assessed using ...
  • Ramond, Jean-Baptiste; Jordaan, Karen; Diez, Beatriz; Heinzelmann, Sandra M.; Cowan, Don A. (American Society for Microbiology, 2022-06)
    Arid ecosystems cover ∼40% of the Earth’s terrestrial surface and store a high proportion of the global nitrogen (N) pool. They are low-productivity, low-biomass, and polyextreme ecosystems, i.e., with (hyper)arid and ...
  • Makhalanyane, Thulani Peter; Valverde, Angel; Gunnigle, Eoin; Frossard, Aline; Ramond, Jean-Baptiste; Cowan, Don A. (Oxford University Press, 2015-03)
    A significant proportion of the Earth's surface is desert or in the process of desertification. The extreme environmental conditions that characterize these areas result in a surface that is essentially barren, with a ...
  • Cowan, Don A.; Hopkins, D.W.; Jones, B.E.; Maggs-Kolling, G.; Majewska, R.; Ramond, Jean-Baptiste (Springer, 2020-01)
    The Namib Desert is one of the world’s only truly coastal desert ecosystem. Until the end of the 1st decade of the twenty-first century, very little was known of the microbiology of this southwestern African desert, with ...
  • Houldcroft, C.J.; Ramond, Jean-Baptiste; Rifkin, Riaan F.; Underdown, S.J. (Taylor and Francis, 2017-05)
    BACKGROUND: The biology of human migration can be observed from the co-evolutionary relationship with infectious diseases. While many pathogens are brief, unpleasant visitors to human bodies, others have the ability to ...
  • Welz, Pamela J..; Ramond, Jean-Baptiste; Cowan, Don A.; Burton, Stephanie G.; Le Roes-Hill, Marilize (Springer, 2014-03)
    The formation of environmentally toxic acidic waste from mining activities is a world-wide problem. Neutralization of this waste can be accomplished by physicochemical and/or biological means. In this short-term study, ...