Browsing Natural and Agricultural Sciences by UP Author "Duong, Tuan A."

Browsing Natural and Agricultural Sciences by UP Author "Duong, Tuan A."

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  • Fungal systematics and evolution : FUSE 2 
    Hernandez-Restrepo, Margarita; Schumacher, Rene K.; Wingfield, Michael J.; Ahmad, Ishtiaq; Cai, Lei; Duong, Tuan A.; Edwards, Jacqueline; Gene, Josepa; Groenewald, Johannes Zacharias; Jabeen, Sana; Khalid, Abdul Nasir; Lombard, Lorenzo; Madrid, Hugo; Marin-Felix, Yasmina; Marincowitz, Seonju; Miller, Andrew N.; Rajeshkumar, Kunhiraman C.; Rashid, Abdul; Sarwar, Samina; Stchigel, Alberto M.; Taylor, Paul W.J.; Zhou, Nan; Crous, Pedro W. (Verlag Ferdinand Berger, 2016-09)
    The present study introduces two new genera, 14 new species, five new combinations and 12 interesting host and/or geographical records. A majority of the fungi are Ascomycetes, but the study also includes a Basidiomycete, ...
  • Generic boundaries in the Ophiostomatales reconsidered and revised 
    De Beer, Z. Wilhelm; Procter, M.; Wingfield, Michael J.; Marincowitz, Seonju; Duong, Tuan A. (Elsevier, 2022-03-30)
    The Ophiostomatales was erected in 1980. Since that time, several of the genera have been redefined and others have been described. There are currently 14 accepted genera in the Order. They include species that are the ...
  • Genome of the destructive oomycete Phytophthora cinnamomi provides insights into its pathogenicity and adaptive potential 
    Engelbrecht, Juanita; Duong, Tuan A.; Prabhu, Sreedhara Ashok; Seedat, Mohamed; Van den Berg, Noelani (BMC, 2021)
    BACKGROUND: Phytophthora cinnamomi is an oomycete pathogen of global relevance. It is considered as one of the most invasive species, which has caused irreversible damage to natural ecosystems and horticultural crops. ...
  • A high-quality draft genome sequence of Neonectria faginata, causative agent of beech bark disease of Fagus grandifolia 
    Morrison, Eric W.; Duong, Tuan A.; Garnas, Jeff R. (American Society for Microbiology, 2024-02)
    The draft genome of Neonectria faginata was sequenced with Oxford Nanopore and Illumina 250 bp paired-end sequencing technologies. The assembled genome was 42.9 Mb distributed over 24 contigs, with N50 of 4.4 Mb and 98.6% ...
  • IMA genome - F14 : Draft genome sequences of Penicillium roqueforti, Fusarium sororula, Chrysoporthe puriensis, and Chalaropsis populi 
    Van der Nest, Magrieta Aletta; Chavez, Renato; De Vos, Lieschen; Duong, Tuan A.; Gil-Duran, Carlos; Ferreira, Maria Alves; Lane, Frances Alice; Levican, Gloria; Santana, Quentin C.; Steenkamp, Emma Theodora; Suzuki, Hiroyuki; Tello, Mario; Rakoma, Jostina R.; Vaca, Inmaculada; Valdes, Natalia; Wilken, Pieter Markus; Wingfield, Michael J.; Wingfield, Brenda D. (International Mycological Association, 2021-03-05)
    Draft genomes of Penicillium roqueforti, Fusarium sororula, Chalaropsis populi, and Chrysoporthe puriensis are presented. Penicillium roqueforti is a model fungus for genetics, physiological and metabolic studies, as well ...
  • IMA Genome - F15 : Draft genome assembly of Fusarium pilosicola, Meredithiella fracta, Niebla homalea, Pyrenophora teres hybrid WAC10721, and Teratosphaeria viscida 
    Duong, Tuan A.; Aylward, Janneke; Ametrano, Claudio Gennaro; Poudel, Barsha; Santana, Quentin C.; Wilken, Pieter Markus; Martin, Anke; Arun‑Chinnappa, Kiruba Shankari; De Vos, Lieschen; DiStefano, Isabel; Grewe, Felix; Huhndorf, Sabine; Lumbsch, Helge Thorsten; Rakoma, Jostina R.; Poudel, Barsha; Steenkamp, Emma Theodora; Sun, Yukun; Van der Nest, Magrieta Aletta; Wingfield, Michael J.; Yilmaz, Neriman; Wingfield, Brenda D. (International Mycological Association, 2021-10-13)
    No abstract available.
  • IMA Genome - F16 : Draft genome assemblies of Fusarium marasasianum, Huntiella abstrusa, two Immersiporthe knoxdaviesiana isolates, Macrophomina pseudophaseolina, Macrophomina phaseolina, Naganishia randhawae, and Pseudocercospora cruenta 
    Wingfield, Brenda D.; De Vos, Lieschen; Wilson, Andi M.; Duong, Tuan A.; Vaghefi, Niloofar; Botes, Angela; Kharwar, Ravindra Nath; Chand, Ramesh; Poudel, Barsha; Aliyu, Habibu; Barbetti, Martin J.; Chen, ShuaiFei; De Maayer, Pieter; Liu, FeiFei; Navathe, Sudhir; Sinha, Shagun; Steenkamp, Emma Theodora; Suzuki, Hiroyuki; Tshisekedi, Kalonji A.; Van der Nest, Magrieta Aletta; Wingfield, Michael J. (BMC, 2022-02)
    Draft genome assemblies of Fusarium marasasianum, Huntiella abstrusa, two Immersiporthe knoxdaviesiana isolates, Macrophomina pseudophaseolina, Macrophomina phaseolina, Naganishia randhawae, and Pseudocercospora cruenta.
  • IMA Genome-F 11 : draft genome sequences of Fusarium xylarioides, Teratosphaeria gauchensis and T. zuluensis and genome annotation for Ceratocystis fimbriata 
    Wingfield, Brenda D.; Fourie, Arista; Simpson, Melissa Claire; Bushula-Njah, Vuyiswa; Aylward, Janneke; Barnes, Irene; Coetzee, Martin Petrus Albertus; Dreyer, Leanne Laurette; Duong, Tuan A.; Geiser, David M.; Roets, Francois; Steenkamp, Emma Theodora; Van der Nest, Magrieta Aletta; Van Heerden, Carel J.; Wingfield, Michael J. (International Mycological Association, 2019)
    Draft genomes of the fungal species Fusarium xylarioides, Teratosphaeria gauchensis and T. zuluensis are presented. In addition an annotation of the genome of Ceratocystis fimbriata is presented. Overall these genomes ...
  • IMA Genome-F13 : draft genome sequences of Ambrosiella cleistominuta, Cercospora brassicicola, C. citrullina, Physcia stellaris, and Teratosphaeria pseudoeucalypti 
    Wilken, Pieter Markus; Aylward, Janneke; Chand, Ramesh; Grewe, Felix; Lane, Frances Alice; Sinha, Shagun; Ametrano, Claudio; Distefano, Isabel; Divakar, Pradeep K.; Duong, Tuan A.; Huhndorf, Sabine; Kharwar, Ravindra N.; Lumbsch, H. Thorsten; Navathe, Sudhir; Perez, Carlos A.; Ramirez-Berrutti, Nazaret; Sharma, Rohit; Sun, Yukun; Wingfield, Brenda D.; Wingfield, Michael J. (BioMed Central, 2020-09)
    Draft genomes of the fungal species Ambrosiella cleistominuta, Cercospora brassicicola, C. citrullina, Physcia stellaris, and Teratosphaeria pseudoeucalypti are presented. Physcia stellaris is an important lichen forming ...
  • IMA genome‑F17 : draft genome sequences of an Armillaria species from Zimbabwe, Ceratocystis colombiana, Elsinoë necatrix, Rosellinia necatrix, two genomes of Sclerotinia minor, short‑read genome assemblies and annotations of four Pyrenophora teres isolates from barley grass, and a long-read genome assembly of Cercospora zeina 
    Wingfield, Brenda D.; Berger, David Kenneth; Coetzee, Martin Petrus Albertus; Duong, Tuan A.; Martin, Anke; Pham, Nam Q.; Van den Berg, Noelani; Wilken, Pieter Markus; Arun‑Chinnappa, Kiruba Shankari; Barnes, Irene; Buthelezi, Sikelela; Dahanayaka, Buddhika Amarasinghe; Duran, Alvaro; Engelbrecht, Juanita; Feurtey, Alice; Fourie, Arista; Fourie, Gerda; Hartley, Jesse Marion Holland; Kabwe, Eugene N. K.; Maphosa, Mkhululi N.; Mensah, Deborah L. Narh; Nsibo, David L.; Potgieter, Lizel; Poudel, Barsha; Stukenbrock, Eva H.; Thomas, Chanel; Vaghefi, Niloofar; Welgemoed, Tanya; Wingfield, Michael J. (International Mycological Association, 2022-11-21)
    No abstract available.
  • In silico secretome analyses of the polyphagous root-knot nematode Meloidogyne javanica : a resource for studying M. javanica secreted protein 
    Macharia, Teresia N.; Duong, Tuan A.; Moleleki, Lucy N. (BMC, 2023-06)
    BACKGROUND: Plant-parasitic nematodes (PPNs) that cause most damage include root-knot nematodes (RKNs) which are a major impediment to crop production. Root-knot nematodes, like other parasites, secrete proteins which are ...
  • Mating strategy and mating type distribution in six global populations of the Eucalyptus foliar pathogen Teratosphaeria destructans 
    Havenga, Minette; Wingfield, Brenda D.; Wingfield, Michael J.; Roets, Francois; Dreyer, Leanne Laurette; Tatham, Catherine; Duong, Tuan A.; Wilken, Pieter Markus; Chen, ShuaiFei; Aylward, Janneke (Elsevier, 2020-04)
    Teratosphaeria destructans is an aggressive fungal pathogen causing leaf and shoot blight on young Eucalyptus trees in plantations. The disease occurs across tropical and subtropical regions of South East Asia and has ...
  • Mating type markers reveal high levels of heterothallism in Leptographium sensu lato 
    Duong, Tuan A.; De Beer, Z. Wilhelm; Wingfield, Brenda D.; Wingfield, Michael J. (Elsevier, 2016-04)
    Species of Leptographium sensu lato (Ophiostomatales, Ascomycetes) are sap-stain fungi vectored by bark beetles (Coleoptera, Scolytinae) and some species cause or are associated with tree diseases. Sexual states have ...
  • Molecular basis of cycloheximide resistance in the Ophiostomatales revealed 
    Wingfield, Brenda D.; Wingfield, Michael J.; Duong, Tuan A. (Springer, 2022-08)
    Resistance to the antibiotic Cycloheximide has been reported for a number of fungal taxa. In particular, some yeasts are known to be highly resistant to this antibiotic. Early research showed that this resulted from a ...
  • New and interesting fungi. 4 
    Crous, Pedro W.; Hernandez-Restrepo, H.; Schumacher, R.K.; Cowan, Don A.; Maggs-Kolling, G.; Marais, E.; Wingfield, Michael J.; Yilmaz, Neriman; Adan, O.C.G.; Akulov, A.; Alvarez Duarte, E.; Berraf-Tebbal, A.; Bulgakov, T.S.; Carnegie, A.J.; De Beer, Z. Wilhelm; Decock, C.; Dijksterhuis, J.; Duong, Tuan A.; Eichmeier, A.; Hien, L.T.; Houbraken, J.A.M.P.; Khanh, T.N.; Liem, N.V.; Lombard, L.; Lutzoni, F.M.; Miadlikowska, J.M.; Nel, Wilma Janine; Pascoe, I.G.; Roets, F.; Roux, Jolanda; Samson, R.A.; Shen, M.; Spetik, M.; Thangavel, R.; Thanh, H.M.; Thao, L.D.; Van Nieuwenhuijzen, E.J.; Zhang, J.Q.; Zhang, Y.; Zhao, L.L.; Groenewald, Johannes Zacharias (Westerdijk Fungal Biodiversity Institute, 2021-04-28)
    An order, family and genus are validated, seven new genera, 35 new species, two new combinations, two epitypes, two lectotypes, and 17 interesting new host and / or geographical records are introduced in this study. Validated ...
  • A new Leptographium species from the roots of declining Pinus sylvestris in Switzerland 
    Marincowitz, Seonju; Duong, Tuan A.; Heiniger, U.; Wingfield, Brenda D.; Wingfield, Michael J.; De Beer, Z. Wilhelm (Wiley, 2017-08)
    Scots pine (Pinus sylvestris) trees have been declining in the Rhône valley, Switzerland, for almost three decades. In an assessment of the role of fungi in this syndrome, the dominant fungus isolated from stained roots ...
  • New microsatellite markers for population studies of Phytophthora cinnamomi, an important global pathogen 
    Engelbrecht, Juanita; Duong, Tuan A.; Van der Berg, Noelani (Nature Publishing Group, 2017-12-15)
    Phytophthora cinnamomi is the causal agent of root rot, canker and dieback of thousands of plant species around the globe. This oomycete not only causes severe economic losses but also threatens natural ecosystems. In ...
  • New ophiostomatoid fungi from wounds on storm-damaged trees in Afromontane forests of the Cape Floristic Region 
    Musvuugwa, Tendai; De Beer, Z. Wilhelm; Dreyer, Leanne Laurette; Duong, Tuan A.; Marincowitz, Seonju; Oberlander, Kenneth C.; Roets, Francois (Springer, 2020-01)
    Ophiostomatoid fungi, a well-known tree-associated group, include some of the most important forest pathogens globally. Several ophiostomatoid species were reported already from Rapanea melanophloeos of the Afromontane ...
  • One fungus, which genes? Development and assessment of universal primers for potential secondary fungal DNA barcodes 
    Stielow, J.B.; Levesque, C.A.; Seifert, K.A.; Meyer, W.; Irinyi, L.; Smits, D.; Renfurm, R.; Verkley, G.J.M.; Groenewald, M.; Chaduli, D.; Lomascolo, A.; Welti, S.; Lesage-Meessen, L.; Favel, A.; Al-Hatmi, A.M.S.; Damm, U.; Yilmaz, Neriman; Houbraken, J.; Lombard, L.; Quaedvlieg, W.; Binder, M.; Vaas, L.A.I.; Vu, D.; Yurkov, A.; Begerow, D.; Roehl, O.; Guerreiro, M.; Fonseca, A.; Samerpitak, K.; van Diepeningen, A.D.; Dolatabadi, S.; Moreno, L.F.; Casaregola, S.; Mallet, S.; Jacques, Noémie; Roscini, L.; Egidi, E.; Bizet, C.; Garcia-Hermoso, D.; Martin, M.P.; Deng, S.; Groenewald, Johannes Zacharias; Boekhout, T.; De Beer, Z. Wilhelm; Barnes, Irene; Duong, Tuan A.; Wingfield, Michael J.; De Hoog, G.S.; Crous, Pedro W.; Lewis, C.T.; Hambleton, S.; Moussa, T.A.A.; Al-Zahrani, H.S.; Almaghrabi, O.A.; Louis-Seize, G.; Assabgui, R.; McCormick, W.; Omer, G.; Dukik, K.; Cardinali, G.; Eberhardt, U.; De Vries, M.; Robert, V. (Naturalis Biodiversity Center and Centraalbureau voor Schimmelcultures, 2015-08-28)
    The aim of this study was to assess potential candidate gene regions and corresponding universal primer pairs as secondary DNA barcodes for the fungal kingdom, additional to ITS rDNA as primary barcode. Amplification ...
  • Ophiostomatalean fungi associated with wood boring beetles in South Africa including two new species 
    Nel, Wilma Janine; Wingfield, Michael J.; De Beer, Z. Wilhelm; Duong, Tuan A. (Springer, 2021-06)
    Ambrosia beetles are small wood inhabiting members of the Curculionidae that have evolved obligate symbioses with fungi. The fungal symbionts concentrate nutrients from within infested trees into a usable form for their ...