Browsing Natural and Agricultural Sciences by Title

Browsing Natural and Agricultural Sciences by Title

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  • Transcript and protein profiling identifies signaling, growth arrest, apoptosis, and NF-kappa B survival signatures following GNRH receptor activation 
    Meyer, Colette; Sims, Andrew H.; Morgan, Kevin; Harrison, Beth; Muir, Morwenna; Bai, Jianing; Faratian, Dana; Millar, Robert P.; Langdon, Simon P. (BioScientifica Ltd, 2013)
    GNRH significantly inhibits proliferation of a proportion of cancer cell lines by activating GNRH receptor (GNRHR)-G protein signaling. Therefore, manipulation of GNRHR signaling may have an under-utilized role in treating ...
  • Transcript profiling of wheat genes expressed during feeding by two different biotypes of Diuraphis noxia 
    Botha, Anna-Maria; Swanevelder, Zacharias Hendrik; Lapitan, Nora L.V.; Swanevelder, Dirk (Entomological Society of America, 2010-08)
    Diuraphis noxia (Kurdjumov)(Russian wheat aphid) has severe economic impacts on wheat and barley production in the United States. The interaction between the Russian wheat aphid and its cereal hosts is poorly understood. ...
  • Transcriptional analysis and mutagenesis of the htp fimbrial gene cluster from Pseudomonas aeruginosa PAO1 
    Swanepoel, Amanda (University of Pretoria, 2010-08-05)
    Pseudomonas aeruginosa, a ubiquitous environmental bacterium and an opportunistic human pathogen, is one of the most and best studied biofilm-forming organisms and has emerged as a model organism in the study of surface- ...
  • Transcriptional and genomic analyses reveal an analogous mechanism for a Piperidinyl-Benzimidazolone analog in Babesia divergens compared to other apicomplexans 
    Rossouw, Ingrid (University of Pretoria, 2015)
    Human babesiosis is a rapidly emerging, zoonotic, infectious disease causing potentially lifethreatening malaria-like symptoms in humans. Disease prevalence has escalated over the past 50 years from a few isolated cases ...
  • Transcriptional and post-transcriptional gene regulatory mechanisms in the malaria parasite, Plasmodium falciparum 
    Hobbs, Henriette Renee (University of Pretoria, 2010-10-22)
    Malaria is a devastating disease which affects almost half of the world’s population. Since the description of the malaria genome sequence, various aspects of the parasite have been studied, including drug resistance ...
  • Transcriptional regulation underlying the quantitative genetic response of maize to grey leaf spot disease 
    Christie, Nanette (University of Pretoria, 2014)
    Cercospora zeina causes grey leaf spot (GLS), a yield-limiting disease on maize. The main objective of this study was to exploit maize gene expression data to dissect the quantitative disease response to C. zeina infection. ...
  • Transcriptional reprogramming during recovery from drought stress in Eucalyptus grandis 
    Teshome, Demissew Tesfaye; Zharare, Godfrey Elijah; Ployet, Raphael; Naidoo, Sanushka (Oxford University Press, 2023-06)
    The importance of drought as a constraint to agriculture and forestry is increasing with climate change. Genetic improvement of plants’ resilience is one of the mitigation strategies to curb this threat. Although recovery ...
  • Transcriptional responses of Eucalyptus clones to the gall wasp, Leptocybe invasa 
    Oates, Caryn Nicole (University of Pretoria, 2013)
    Eucalyptus species constitute some of the most widely grown and economically important hardwood trees in global plantation forestry. This is due primarily to their remarkable growth and adaptability. Much of the initial ...
  • Transcriptome analysis of an incompatible Persea americana-Phytophthora cinnamomi interaction reveals the involvement of SA- and JA-pathways in a successful defense response 
    Van den Berg, Noelani; Mahomed, Waheed; Olivier, Nicholas Abraham; Swart, Velushka; Crampton, Bridget Genevieve (Public Library of Science, 2018-10-17)
    Phytophthora cinnamomi Rands (Pc) is a hemibiotrophic oomycete and the causal agent of Phytophthora root rot (PRR) of the commercially important fruit crop avocado (Persea americana Mill.). Plant defense against pathogens ...
  • Transcriptome analysis of Eucalyptus grandis implicates brassinosteroid signaling in defense against myrtle rust (Austropuccinia psidii) 
    Swanepoel, Shae; Oates, Caryn Nicole; Shuey, Louise S.; Pegg, Geoff S.; Naidoo, Sanushka (Frontiers Media, 2021-12-08)
    Eucalyptus grandis, in its native Australian range, varies in resistance to Austropuccinia psidii (syn. Puccinia psidii). The biotrophic rust fungus, A. psidii is the causal agent of myrtle rust and poses a serious threat ...
  • Transcriptome and comparative genomics analyses reveal new functional insights on key determinants of pathogenesis and interbacterial competition in Pectobacterium and Dickeya spp. 
    Bellieny-Rabelo, Daniel; Tanui, Collins Kipngetich; Miguel, Nikki; Kwenda, Stanford; Shyntum, Divine Yufetar; Moleleki, Lucy Novungayo (American Society for Microbiology, 2019-01)
    Soft-rot Enterobacteriaceae (SRE), typified by Pectobacterium and Dickeya genera, are phytopathogenic bacteria inflicting soft-rot disease in crops worldwide. By combining genomic information from 100 SRE with whole-transcriptome ...
  • Transcriptome and hormone profiling reveals Eucalyptus grandis defence responses against Chrysoporthe austroafricana 
    Mangwanda, Ronishree; Myburg, Alexander Andrew; Naidoo, Sanushka (BioMed Central, 2015-04-18)
    BACKGROUND : Eucalyptus species and interspecific hybrids exhibit valuable growth and wood properties that make them a highly desirable commodity. However, these trees are challenged by a wide array of biotic stresses ...
  • The transcriptome of Pinus pinaster under Fusarium circinatum challenge 
    Hernandez-Escribano, Laura; Visser, Erik A.; Iturritxa, Eugenia; Raposo, Rosa; Naidoo, Sanushka (BioMed Central, 2020-01-08)
    BACKGROUND : Fusarium circinatum, the causal agent of pitch canker disease, poses a serious threat to several Pinus species affecting plantations and nurseries. Although Pinus pinaster has shown moderate resistance to F. ...
  • Transcriptome profiling of potato (Solanum tuberosum L.) responses to root-knot nematode (Meloidogyne javanica) infestation during a compatible interaction 
    Macharia, Teresia Nyambura; Bellieny-Rabelo, Daniel; Moleleki, Lucy Novungayo (MDPI, 2020-09)
    Root-knot nematode (RKN) Meloidogyne javanica presents a great challenge to Solanaceae crops, including potato. In this study, we investigated transcriptional responses of potato roots during a compatible interaction ...
  • Transcriptome profiling of potato plant stems challenged with Pectobacterium carotovorum subsp. brasiliense and elucidation of the role of small RNAs in Pectobacterium survival mechanisms 
    Kwenda, Stanford (University of Pretoria, 2016)
    Pectobacterium carotovorum subsp. brasiliense, a necrotrophic phytopathogen belonging to the soft rot Enterobacteriaceae (SRE) family is responsible for causing tuber soft rot and blackleg diseases of stems in potato plants. ...
  • Transcriptome profiling Reveals the EanI/R quorum sensing regulon in Pantoea ananatis LMG 2665(T) 
    Sibanda, Siphathele; Kwenda, Stanford; Tanui, Collins Kipngetich; Shyntum, Divine Yufetar; Coutinho, Teresa A.; Moleleki, Lucy Novungayo (Elsevier, 2018-03)
    Please read abstract in the article.
  • Transcriptome responses of an ungrafted Phytophthora root rot tolerant avocado (Persea americana) rootstock to flooding and Phytophthora cinnamomi 
    Reeksting, Bianca J.; Olivier, Nicholas Abraham; Van den Berg, Noelani (BioMed Central, 2016-09-22)
    BACKGROUND : Avocado (Persea americana Mill.) is a commercially important fruit crop worldwide. A major limitation to production is the oomycete Phytophthora cinnamomi, which causes root rot leading to branch-dieback and ...
  • Transcriptome- and proteome-wide responses to putrescine depletion in the human malaria parasite, Plasmodium falciparum 
    Clark, Katherine (University of Pretoria, 2013)
    Please read the abstract in the document attached.
  • A transcriptome-wide association study among 97,898 women to identify candidate susceptibility genes for epithelial ovarian cancer risk 
    Lu, Yingchang; Beeghly-Fadiel, Alicia; Wu, Lang; Guo, Xingyi; Li, Bingshan; Schildkraut, Joellen M.; Im, HaeKyung; Chen, Yian A.; Permuth, Jennifer B.; Reid, Brett M.; Teer, Jamie K.; Moysich, Kirsten B.; Andrulis, Irene L.; Anton-Culver, Hoda; Arun, Banu K.; Bandera, Elisa V.; Barkardottir, Rosa B.; Barnes, Daniel R.; Benitez, Javier; Bjorge, Line; Brenton, James; Butzow, Ralf; Caldes, Trinidad; Caligo, Maria A.; Campbell, Ian; Chang-Claude, Jenny; Claes, Kathleen B.M.; Couch, Fergus J.; Cramer, Daniel W.; Daly, Mary B.; DeFazio, Anna; Dennis, Joe; Diez, Orland; Domchek, Susan M.; Dörk, Thilo; Easton, Douglas F.; Eccles, Diana M.; Fasching, Peter A.; Fortner, Renée T.; Fountzilas, George; Friedman, Eitan; Ganz, Patricia A.; Garber Judy; Giles, Graham G.; Godwin, Andrew K.; Goldgar, David E.; Goodman, Marc T.; Greene, Mark H.; Gronwald, Jacek; Hamann, Ute; Heitz, Florian; Hildebrandt, Michelle A.T.; Høgdall, Claus K.; Hollestelle, Antoinette; Hulick, Peter J.; Huntsman, David G.; Imyanitov, Evgeny N.; Isaacs, Claudine; Jakubowska, Anna; James, Paul; Karlan, Beth Y.; Kelemen, Linda E.; Kiemeney, Lambertus A.; Kjaer, Susanne K.; Kwong, Ava; Le, Nhu D.; Leslie, Goska; Lesueur, Fabienne; Levine, Douglas A.; Mattiello, Amalia; May, Taymaa; McGuffog, Lesley; McNeish, Iain A.; Merritt, Melissa A.; Modugno, Francesmary; Montagna, Marco; Neuhausen, Susan L.; Nevanlinna, Heli; Nielsen, Finn C.; Nikitina-Zake, Liene; Nussbaum, Robert L.; Offit, Kenneth; Olah, Edith; Olopade, Olufunmilayo I.; Olson, Sara H.; Olsson, Håkan K.; Osorio, Ana; Park, Sue K.; Parsons, Michael T.; Peeters, Petra H.M.; Pejovic, Tanja; Peterlongo, Paolo; Phelan, Catherine M.; Pujana, Miquel Angel; Ramus, Susan J.; Rennert, Gad; Risch, Harvey; Rodriguez, Gustavo C.; Rodríguez-Antona, Cristina; Romieu, Isabelle; Rookus, Matti A.; Rossing, Mary Anne; Rzepecka, Iwona K.; Sandler, Dale P.; Schmutzler, Rita K.; Setiawan, Veronica W.; Sharma, Priyanka; Sieh, Weiva; Simard, Jacques; Singer, Christian F.; Song, Honglin; Southey, Melissa C.; Spurdle, Amanada B.; Sutphen, Rebecca; Swerdlow, Anthony J.; Teixeira, Manuel R.; Teo, Soo H.; Thomassen, Mads; Tischkowitz, Marc; Toland, Amanda E.; Trichopoulou, Antonia; Tung, Nadine; Tworoger, Shelley S.; Jansen van Rensburg, Elizabeth; Vanderstichele, Adriaan; Vega, Ana; Edwards, Digna Velez; Webb, Penelope M.; Weitzel, Jeffrey N.; Wentzensen, Nicolas; White, Emily; Wolk, Alicja; Wu, Anna H.; Yannoukakos, Drakoulis; Zorn, Kristin K.; Gayther, Simon A.; Antoniou, Antonis C.; Berchuck, Andrew; Goode, Ellen L.; Chenevix-Trench, Georgia; Sellers, Thomas A.; Pharoah, Paul D.P.; Zheng, Wei; Long, Jirong (American Association for Cancer Research, 2018-09)
    Large-scale genome-wide association studies (GWAS) have identified approximately 35 loci associated with epithelial ovarian cancer (EOC) risk. The majority of GWAS-identified disease susceptibility variants are located in ...
  • Transcriptome-wide association study of breast cancer risk by estrogen-receptor status 
    Feng, Helian; Gusev, Alexander; Pasaniuc, Bogdan; Wu, Lang; Long, Jirong; Abu-full, Zomoroda; Aittomäki, Kristiina; Andrulis, Irene L.; Anton-Culver, Hoda; Antoniou, Antonis C.; Arason, Adalgeir; Arndt, Volker; Aronson, Kristan J.; Arun, Banu K.; Asseryanis, Ella; Auer, Paul L.; Azzollini, Jacopo; Balmana, Judith; Barkardottir, Rosa B.; Barnes, Daniel R.; Barrowdale, Daniel; Beckmann, Matthias W.; Behrens, Sabine; Benitez, Javier; Bermisheva, Marina; Białkowska, Katarzyna; Blanco, Ana; Blomqvist, Carl; Boeckx, Bram; Bogdanova, Natalia V.; Bojesen, Stig E.; Bolla, Manjeet K.; Bonanni, Bernardo; Borg, Ake; Brauch, Hiltrud; Brenner, Hermann; Briceno, Ignacio; Broeks, Annegien; Bruning, Thomas; Burwinkel, Barbara; Cai, Qiuyin; Caldés, Trinidad.; Caligo, Maria A.; Campbell, Ian; Canisius, Sander; Campa, Daniele; Carter, Brian D.; Carter, Jonathan; Castelao, Jose E.; Chang-Claude, Jenny; Chanock, Stephen J.; Christiansen, Hans; Chung, Wendy K.; Claes, Kathleen B.M.; Clarke, Christine L.; Couch, Fergus J.; Cox, Angela; Cross, Simon S.; Cybulski, Cezary; Czene, Kamila; Daly, Mary B.; De la Hoya, Miguel; De Leeneer, Kim; Dennis, Joe; Devilee, Peter; Diez, Orland; Domchek, Susan M.; Dork, Thilo; Dos-Santos-Silva, Isabel; Dunning, Alison M.; Dwek, Miriam; Eccles, Diana M.; Ejlertsen, Bent; Ellberg, Carolina; Engel, Christoph; Eriksson, Mikael; Fasching, Peter A.; Fletcher, Olivia; Flyger, Henrik; Fostira, Florentia; Friedman, Eitan; Fritschi, Lin; Frost, Debra; Gabrielson, Marike; Ganz, Patricia A.; Gapstur, Susan M.; Garber, Judy; Garcia-Closas, Montserrat; Garcia-Saenz, Jose A.; Gaudet, Mia M.; Giles, Graham G.; Glendon, Gord; Godwin, Andrew K.; Goldberg, Mark S.; Goldgar, David E.; Gonzalez-Neira, Anna; Greene, Mark H.; Gronwald, Jacek; Guénel, Pascal; Haiman, Christopher A.; Hall, Per; Hamann, Ute; Hake, Christopher; He, Wei; Heyworth, Jane; Hogervorst, Frans B.L.; Hollestelle, Antoinette; Hooning, Maartje J.; Hoover, Robert N.; Hopper, John L.; Huang, Guanmengqian; Humphreys, Keith; Imyanitov, Evgeny N.; Isaacs, Claudine; Jakimovska, Milena; Jakubowska, Anna; James, Paul; Janavicius, Ramunas; Jankowitz, Rachel C.; John, Esther M.; Johnson, Nichola; Joseph, Vijai; Jung, Audrey; Karlan, Beth Y.; Khusnutdinova, Elza; Kiiski, Johanna I.; Konstantopoulou, Irene; Kristensen, Vessela; Laitman, Yael; Lambrechts, Diether; Lazaro, Conxi; Leroux, Dominique; Leslie, Goska; Lester, Jenny; Lesueur, Fabienne; Lindor, Noralane; Lindstrom, Sara; Lo, Wing-Yee; Loud, Jennifer T.; Lubinski, Jan; Makalic, Enes; Mannermaa, Arto; Manoochehri, Mehdi; Manoukian, Siranoush; Margolin, Sara; Martens, John W.M.; Martinez, Maria E.; Matricardi, Laura; Maurer, Tabea; Mavroudis, Dimitrios; McGuffog, Lesley; Meindl, Alfons; Menon, Usha; Michailidou, Kyriaki; Kapoor, Pooja M.; Miller, Austin; Montagna, Marco; Moreno, Fernando; Moserle, Lidia; Mulligan, Anna M.; Muranen, Taru A.; Nathanson, Katherine L.; Neuhausen, Susan L.; Nevanlinna, Heli; Nevelsteen, Ines; Nielsen, Finn C.; Nikitina-Zake, Liene; Offit, Kenneth; Olah, Edith; Olopade, Olufunmilayo I.; Olsson, Hakan; Osorio, Ana; Papp, Janos; Park-Simon, Tjoung-Won; Parsons, Michael T.; Pedersen, Inge S.; Peixoto, Ana; Peterlongo, Paolo; Peto, Julian; Pharoah, Paul D.P.; Phillips, Kelly-Anne; Plaseska-Karanfilska, Dijana; Poppe, Bruce; Pradhan, Nisha; Prajzendanc, Karolina; Presneau, Nadege; Punie, Kevin; Pylkäs, Katri; Radice, Paolo; Rantala, Johanna; Rashid, Muhammad Usman; Rennert, Gad; Risch, Harvey A.; Robson, Mark; Romero, Atocha; Saloustros, Emmanouil; Sandler, Dale P.; Santos, Catarina; Sawyer, Elinor J.; Schmidt, Marjanka K.; Schmidt, Daniel F.; Schmutzler, Rita K.; Schoemaker, Minouk J.; Scott, Rodney J.; Sharma, Priyanka; Shu, Xiao-Ou; Simard, Jacques; Singer, Christian F.; Skytte, Anne-Bine; Soucy, Penny; Southey, Melissa C.; Spinelli, John J.; Spurdle, Amanda B.; Stone, Jennifer; Swerdlow, Anthony J.; Tapper, William J.; Taylor, Jack A.; Teixeira, Manuel R.; Terry, Mary Beth; Teule, Alex; Thomassen, Mads; Thöne, Kathrin; Thull, Darcy L.; Tischkowitz, Marc; Toland, Amanda E.; Tollenaar, Rob A.E.M.; Torres, Diana; Truong, Therese; Tung, Nadine; Vachon, Celine M.; Van den Ouweland, Ans M.W.; Van Asperen, Christi J.; Jansen van Rensburg, Elizabeth; Vega, Ana; Viel, Alessandra; Vieiro-Balo, Paula; Wang, Qin; Wappenschmidt, Barbara; Weinberg, Clarice R.; Weitzel, Jeffrey N.; Wendt, Camilla; Winqvist, Robert; Yang, Xiaohong R.; Yannoukakos, Drakoulis; Ziogas, Argyrios; Milne, Roger L.; Easton., Douglas F.; Chenevix-Trench, Georgia; Zheng, Wei; Kraft, Peter; Jiang, Xia (Wiley, 2020-07)
    Previous transcriptome-wide association studies (TWAS) have identified breast cancer risk genes by integrating data from expression quantitative loci and genome-wide association studies (GWAS), but analyses of breast ...