Browsing Genetics by Subject "Whole-genome duplication (WGD)"

Browsing Genetics by Subject "Whole-genome duplication (WGD)"

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  • Distinct expression and methylation patterns for genes with different fates following a single whole-genome duplication in flowering plants 
    Shi, Tao; Rahmani, Razgar Seyed; Gugger, Paul F.; Wang, Muhua H.; Li, Hui; Zhang, Yue; Li, Zhizhong; Wang, Qingfeng; Van de Peer, Yves; Marchal, Kathleen; Chen, Jinming (Oxford University Press, 2020-08)
    For most sequenced flowering plants, multiple whole-genome duplications (WGDs) are found. Duplicated genes following WGD often have different fates that can quickly disappear again, be retained for long(er) periods, or ...
  • Genome of wild olive and the evolution of oil biosynthesis 
    Unver, Turgay; Wu, Zhangyan; Sterck, Lieven; Turktas, Mine; Lohaus, Rolf; Li, Zhen; Yang, Ming; He, Lijuan; Deng, Tianquan; Javier Escalante; Llorens, Carlos; Roig, Francisco J.; Parmaksiz, Iskender; Dundar, Ekrem; Xie, Fuliang; Zhang, Baohong; lpek, Arif; Uranbey, Serkan; Erayman, Mustafa; llhan, Emre; Badad, Oussama; Ghazal, Hassan; Lightfoot, David A.; Kasarla, Pavan; Colantonio, Vincent; Tombuloglu, Huseyin; Hernandez, Pilar; Mete, Nurengin; Cetin, Oznur; Van Montagu, Marc; Yang, Huanming; Gao, Qiang; Dorado, Gabriel; Van de Peer, Yves (National Academy of Sciences, 2017-10)
    Here we present the genome sequence and annotation of the wild olive tree (Olea europaea var. sylvestris), called oleaster, which is considered an ancestor of cultivated olive trees. More than 50,000 protein-coding genes ...
  • Model-based detection of whole-genome duplications in a phylogeny 
    Zwaenepoel, Arthur; Van de Peer, Yves (Oxford University Press, 2020-09)
    Ancient whole-genome duplications (WGDs) leave signatures in comparative genomic data sets that can be harnessed to detect these events of presumed evolutionary importance. Current statistical approaches for the detection ...
  • Multi-faceted analysis provides little evidence for recurrent whole-genome duplications during hexapod evolution 
    Roelofs, Dick; Zwaenepoel, Arthur; Sistermans, Tom; Nap, Joey; Kampfraath, Andries A.; Van de Peer, Yves; Ellers, Jacintha; Kraaijeveld, Ken (BioMed Central, 2020-05)
    BACKGROUND: Gene duplication events play an important role in the evolution and adaptation of organisms. Duplicated genes can arise through different mechanisms, including whole-genome duplications (WGDs). Recently, WGD ...
  • Polyploidy and genome evolution in plants 
    Soltis, Pamela S.; Marchant, D. Blaine; Van de Peer, Yves; Soltis, Douglas E. (Elsevier, 2015-12)
    Plant genomes vary in size and complexity, fueled in part by processes of whole-genome duplication (WGD; polyploidy) and subsequent genome evolution. Despite repeated episodes of WGD throughout the evolutionary history ...
  • Revisiting ancestral polyploidy in plants 
    Ruprecht, Colin; Lohaus, Rolf; Vanneste, Kevin; Mutwil, Marek; Nikoloski, Zoran; Van de Peer, Yves; Persson, Staffan (American Association for the Advancement of Science, 2017-07-05)
    Whole-genome duplications (WGDs) or polyploidy events have been studied extensively in plants. In a now widely cited paper, Jiao et al. presented evidence for two ancient, ancestral plant WGDs predating the origin of ...
  • “Winter is coming” : how did polyploid plants survive? 
    Li, Zhen; Van de Peer, Yves (Elsevier, 2020-01)
    No abstract available.