Antibacterial activity of synthetic peptide W5(Os-C) against Staphylococcus epidermidis ATCC 35984

Show simple item record

dc.contributor.advisor Gaspar, A.R.M. (Anabella Regina Marques)
dc.contributor.coadvisor Bester, Megan J.
dc.contributor.postgraduate van Heerden, Lize Janeska
dc.date.accessioned 2024-02-16T07:36:32Z
dc.date.available 2024-02-16T07:36:32Z
dc.date.created 2024-04-16
dc.date.issued 2024-02-15
dc.description Dissertation (MSc (Biochemistry))--University of Pretoria, 2024. en_US
dc.description.abstract Antimicriobial resistant Staphylococcus epidermidis infections are rapidly increasing. A promising research avenue is the use of antimicrobial peptides (AMPs). From AMP OsDef2, C-terminal fragments Os and Os-C were generated, but activity loss in physiological salt environments limits clinical applications. As an attempt to increase the antimicrobial activity under these conditions, Os-C was tagged on the N-terminal with five tryptophan residues. The minimum inhibitory concentrations (MICs) for the anti-planktonic activity of W5(Os-C) (W), vancomycin (V), and combination ratios 3V:1W and 2V:2W were 2.44 µM, 3.83 µM, 3.31 µM and 3.63 µM respectively. The biofilm inhibition concentrations (BICs) of W5(Os-C), vancomycin, and combination ratios 3V:1W and 2V:2W were 3.81 µM, 3.06 µM, 3.48 µM and 4.51 µM respectively for cell viability, and 3.76 µM, 3.07 µM, 6.68 µM and 4.40 µM respectively for biomass inhibition. Antimicrobial combinations failed to achieve synergism. In silico studies revealed that W5(Os-C) formed dimers or trimers and inserted into a model Gram-positive membrane regardless of salt concentration. Peptide-peptide interactions in a physiological salt environment were both hydrophilic and hydrophobic, but mainly hydrophobic in a higher salt environment. Irrespective of salt concentration, W5(Os-C) inserted into the Gram-positive model membrane via the N-terminal tryptophan tag but inserted deeper in the higher salt environment. In conclusion, N-terminal tagging of Os-C with tryptophan residues increases the anti-planktonic and biofilm inhibitory activity, mediated by dimer/trimer formation and N-terminal insertion into S. epidermidis model membranes. en_US
dc.description.availability Unrestricted en_US
dc.description.degree MSc (Biochemistry) en_US
dc.description.department Biochemistry en_US
dc.description.faculty Faculty of Natural and Agricultural Sciences en_US
dc.description.sponsorship University of Pretoria en_US
dc.description.sponsorship National Research Foundation en_US
dc.identifier.citation * en_US
dc.identifier.doi https://doi.org/10.25403/UPresearchdata.25225163 en_US
dc.identifier.other A2024 en_US
dc.identifier.uri http://hdl.handle.net/2263/94669
dc.language.iso en en_US
dc.publisher University of Pretoria
dc.rights © 2023 University of Pretoria. All rights reserved. The copyright in this work vests in the University of Pretoria. No part of this work may be reproduced or transmitted in any form or by any means, without the prior written permission of the University of Pretoria.
dc.subject UCTD en_US
dc.subject Antibacterial en_US
dc.subject Staphylococcus epidermidis en_US
dc.subject Antimicrobial peptide en_US
dc.subject Molecular dynamic simulation en_US
dc.subject Vancomycin en_US
dc.subject.other Sustainable Development Goals (SDGs)
dc.subject.other SDG-03: Good health and well-being
dc.subject.other Natural and agricultural sciences theses SDG-03
dc.subject.other SDG-09: Industry, innovation and infrastructure
dc.subject.other Natural and agricultural sciences theses SDG-09
dc.title Antibacterial activity of synthetic peptide W5(Os-C) against Staphylococcus epidermidis ATCC 35984 en_US
dc.type Dissertation en_US


Files in this item

This item appears in the following Collection(s)

Show simple item record