Low-cost capacitive CMOS capacitive E. Coli biosensor for point-of-need water quality monitoring

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dc.contributor.advisor Joubert, Trudi-Heleen
dc.contributor.postgraduate Andrews, George
dc.date.accessioned 2023-12-19T12:28:35Z
dc.date.available 2023-12-19T12:28:35Z
dc.date.created 2024-04
dc.date.issued 2023
dc.description Dissertation (MEng (Microelectronic Engineering))--University of Pretoria, 2023. en_US
dc.description.abstract Exposure to pathogenic Escherichia coli (E. coli) bacteria through contaminated water can cause potentially life-threatening diarrhea and vomiting, and it is a useful water quality indicator. Simulations and experiments are conducted to give guidelines on low-cost capacitive biosensing devices aimed at bacterial sensing, and a custom integrated circuit that can be used in a low-cost capacitive biosensing device is delivered. Finite element modelling was conducted to compare the electric fields (E-fields) and capacitance across different electrode geometries and materials. The size of electrode features had the biggest impact on electric field strength and relative capacitance change in the presence of cell-like structures. The simulation results are used to clarify assumptions on how simulations for the design of capacitive sensing electrodes need to be conducted. Capacitance measurement of low-cost and commercial electrodes was conducted using a benchtop LCR meter and 3 μm microbeads as substitutes for E. coli cells. It was found that the measured capacitance increases as the concentration of microbeads increases, and the low-cost electrodes seem to show a higher-than-expected sensitivity when compared to commercial electrodes with smaller feature sizes. Electric impedance spectroscopy experiments conducted on E. coli cells showed a similar performance as characterisation experiments using microbeads. These insights inform the development of guidelines that may be used to design low-cost electrodes for similar applications. A custom integrated circuit (IC) featuring a capacitive sensing array with sub-surface electrodes was designed and delivered. This IC also includes the custom operational amplifier used in the sensing array, used in a low-cost capacitive biosensor prototype for point-of-need use. The low-cost device was characterised with 3 μm microbeads using a subset of the electrodes used in the LCR experiments, with comparable results achieved using the low-cost device. Lessons learned in the design of the low-cost system guide the development of a design flow for the design of point-of-need water quality monitoring devices and gives guidance on the required hardware to build such devices. en_US
dc.description.availability Unrestricted en_US
dc.description.degree MEng (Microelectronic Engineering) en_US
dc.description.department Electrical, Electronic and Computer Engineering en_US
dc.description.faculty Faculty of Engineering, Built Environment and Information Technology en_US
dc.description.sponsorship NRF Grant IRG105878 en_US
dc.identifier.citation * en_US
dc.identifier.other A2024 en_US
dc.identifier.uri http://hdl.handle.net/2263/93825
dc.language.iso en en_US
dc.publisher University of Pretoria
dc.rights © 2023 University of Pretoria. All rights reserved. The copyright in this work vests in the University of Pretoria. No part of this work may be reproduced or transmitted in any form or by any means, without the prior written permission of the University of Pretoria.
dc.subject UCTD en_US
dc.subject Capacitive biosensing en_US
dc.subject Lab-on-chip en_US
dc.subject Water quality monitoring en_US
dc.subject CMOS en_US
dc.subject E. Coli en_US
dc.subject.other Sustainable Development Goals (SDGs)
dc.subject.other Engineering, built environment and information technology theses SDG-06
dc.subject.other SDG-06: Clean water and sanitation
dc.title Low-cost capacitive CMOS capacitive E. Coli biosensor for point-of-need water quality monitoring en_US
dc.type Dissertation en_US


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