dc.contributor.author |
Mphahlele, M.M. (Makobatjatji)
|
|
dc.contributor.author |
Isik, Fikret
|
|
dc.contributor.author |
Hodge, Gary R.
|
|
dc.contributor.author |
Myburg, Alexander Andrew
|
|
dc.date.accessioned |
2021-04-09T15:25:20Z |
|
dc.date.available |
2021-04-09T15:25:20Z |
|
dc.date.issued |
2021-02 |
|
dc.description |
Supplementary Figure 1. Trait distribution plots of the trial sites. The top row is the diameter growth histogram plot, the middle row is the histogram plot for Lepto incidence scores, and the bottom row is the BotryoTera incidence scores. The last column is the combined distribution of the measured traits across the three sites. |
en_ZA |
dc.description |
Supplementary Figure 2. Frequency plots across the representative pedigree linked and unrelated generations. The top row is the diameter growth histogram plot, the middle row is the histogram plot for Lepto incidence scores, and the bottom row is the BotryoTera incidence scores. |
en_ZA |
dc.description |
Supplementary Table 1. Environmental and trial design information of the study population. The number of families and their pedigree generations are indicated with the phenotyped and genotyped individuals. |
en_ZA |
dc.description |
Table_1_Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalypt.XLSX |
en_ZA |
dc.description |
Table_2_Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalypt.XLSX |
en_ZA |
dc.description |
Table_3_Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalypt.XLSX |
en_ZA |
dc.description |
Table_4_Genomic Breeding for Diameter Growth and Tolerance to Leptocybe Gall Wasp and Botryosphaeria/Teratosphaeria Fungal Disease Complex in Eucalypt.csv |
en_ZA |
dc.description.abstract |
Eucalyptus grandis is one of the most important species for hardwood plantation forestry around the world. At present, its commercial deployment is in decline because of pests and pathogens such as Leptocybe invasa gall wasp (Lepto), and often co-occurring fungal stem diseases such as Botryosphaeria dothidea and Teratosphaeria zuluensis (BotryoTera). This study analyzed Lepto, BotryoTera, and stem diameter growth in an E. grandis multi-environmental, genetic trial. The study was established in three subtropical environments. Diameter growth and BotryoTera incidence scores were assessed on 3,334 trees, and Lepto incidence was assessed on 4,463 trees from 95 half-sib families. Using the Eucalyptus EUChip60K SNP chip, a subset of 964 trees from 93 half-sib families were genotyped with 14,347 informative SNP markers. We employed single-step genomic BLUP (ssGBLUP) to estimate genetic parameters in the genetic trial. Diameter and Lepto tolerance showed a positive genetic correlation (0.78), while BotryoTera tolerance had a negative genetic correlation with diameter growth (−0.38). The expected genetic gains for diameter growth and Lepto and BotryoTera tolerance were 12.4, 10, and −3.4%, respectively. We propose a genomic selection breeding strategy for E. grandis that addresses some of the present population structure problems. |
en_ZA |
dc.description.department |
Biochemistry |
en_ZA |
dc.description.department |
Forestry and Agricultural Biotechnology Institute (FABI) |
en_ZA |
dc.description.department |
Genetics |
en_ZA |
dc.description.department |
Microbiology and Plant Pathology |
en_ZA |
dc.description.librarian |
hj2021 |
en_ZA |
dc.description.sponsorship |
The National Research Foundation (NRF) Bioinformatics and Functional Genomics Program (BFG), the Technology and Human Resources for Industry Program (THRIP) and Mondi South Africa. |
en_ZA |
dc.description.uri |
http://www.frontiersin.org/Plant_Science |
en_ZA |
dc.identifier.citation |
Mphahlele MM, Isik F, Hodge GR
and Myburg AA (2021) Genomic
Breeding for Diameter Growth
and Tolerance to Leptocybe Gall
Wasp
and Botryosphaeria/Teratosphaeria
Fungal Disease Complex
in Eucalyptus grandis.
Frontiers in Plant Science 12:638969.
doi: 10.3389/fpls.2021.638969. |
en_ZA |
dc.identifier.issn |
1664-462X (online) |
|
dc.identifier.other |
10.3389/fpls.2021.638969 |
|
dc.identifier.uri |
http://hdl.handle.net/2263/79377 |
|
dc.language.iso |
en |
en_ZA |
dc.publisher |
Frontiers Media |
en_ZA |
dc.rights |
© 2020 Authors. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). |
en_ZA |
dc.subject |
Eucalyptus grandis |
en_ZA |
dc.subject |
Hardwood |
en_ZA |
dc.subject |
Plantation forestry |
en_ZA |
dc.subject |
Gall wasps |
en_ZA |
dc.subject |
Blue gum chalcid wasp (Leptocybe invasa) |
en_ZA |
dc.subject |
Fungal stem disease |
en_ZA |
dc.subject |
Botryosphaeria dothidea |
en_ZA |
dc.subject |
Teratosphaeria zuluensis |
en_ZA |
dc.title |
Genomic breeding for diameter growth and tolerance to Leptocybe gall wasp and Botryosphaeria/Teratosphaeria fungal disease complex in Eucalyptus grandis |
en_ZA |
dc.type |
Article |
en_ZA |