Establishment and equilibrium levels of deleterious mutations in large populations

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dc.contributor.author Viljoen, Johan W.
dc.contributor.author De Villiers, J Pieter.
dc.contributor.author Van Zyl, Augustinus J.
dc.contributor.author Mezzavilla, Massimo.
dc.contributor.author Pepper, Michael Sean
dc.date.accessioned 2020-08-28T11:16:56Z
dc.date.available 2020-08-28T11:16:56Z
dc.date.issued 2019-07
dc.description.abstract Analytical and statistical stochastic approaches are used to model the dispersion of monogenic variants through large populations. These approaches are used to quantify the magnitude of the selective advantage of a monogenic heterozygous variant in the presence of a homozygous disadvantage. Dunbar’s results regarding the cognitive upper limit of the number of stable social relationships that humans can maintain are used to determine a realistic effective community size from which an individual can select mates. By envisaging human community structure as a network where social proximity rather than physical geography predominates, a significant simplification is achieved, implicitly accounting for the effects of migration and consanguinity, and with population structure and genetic drift becoming emergent features of the model. Effective community size has a dramatic effect on the probability of establishing beneficial alleles. It also affects the eventual equilibrium values that are reached in the case of variants conferring a heterozygous selective advantage, but a homozygous disadvantage, as in the case of cystic fibrosis and sickle cell disease. The magnitude of this selective advantage can then be estimated based on observed occurrence levels of a specific allele in a population, without requiring prior information regarding its phenotypic manifestation. en_ZA
dc.description.department Electrical, Electronic and Computer Engineering en_ZA
dc.description.department Immunology en_ZA
dc.description.department Mathematics and Applied Mathematics en_ZA
dc.description.librarian pm2020 en_ZA
dc.description.uri http://www.nature.com/srep/index.html en_ZA
dc.identifier.citation Viljoen, J.W., De Villiers, J.P., Van Zyl, A.J. et al. 2019,'Establishment and equilibrium levels of deleterious mutations in large populations', Scientific Reports, vol. 9, no. 1, art. 10384, pp. 1-10. en_ZA
dc.identifier.issn 2045-2322 (online)
dc.identifier.other 10.1038/s41598-019-46803-7
dc.identifier.uri http://hdl.handle.net/2263/75951
dc.language.iso en en_ZA
dc.publisher Nature Research en_ZA
dc.rights © The Author(s) 2019. This article is licensed under a Creative Commons Attribution 4.0 International License. en_ZA
dc.subject Computational models en_ZA
dc.subject Experimental models of disease en_ZA
dc.title Establishment and equilibrium levels of deleterious mutations in large populations en_ZA
dc.type Article en_ZA


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