Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata

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dc.contributor.author Wingfield, Brenda D.
dc.contributor.author Bills, Gerald F.
dc.contributor.author Dong, Yang
dc.contributor.author Huang, Wenli
dc.contributor.author Nel, Wilma Janine
dc.contributor.author Swalarsk-Parry, Benedicta S.
dc.contributor.author Vaghefi, Niloofar
dc.contributor.author Wilken, Pieter Markus
dc.contributor.author An, Zhiqiang
dc.contributor.author De Beer, Z. Wilhelm
dc.contributor.author De Vos, Lieschen
dc.contributor.author Chen, Li
dc.contributor.author Duong, Tuan A.
dc.contributor.author Gao, Yun
dc.contributor.author Hammerbacher, Almuth
dc.contributor.author Kikkert, Julie R.
dc.contributor.author Li, Yan
dc.contributor.author Li, Huiying
dc.contributor.author Li, Kuan
dc.contributor.author Li, Qiang
dc.contributor.author Liu, Xingzhong
dc.contributor.author Ma, Xiao
dc.contributor.author Naidoo, Kershney
dc.contributor.author Pethybridge, Sarah J.
dc.contributor.author Sun, Jingzu
dc.contributor.author Steenkamp, Emma Theodora
dc.contributor.author Van der Nest, Magrieta Aletta
dc.contributor.author Van Wyk, Stephanie
dc.contributor.author Wingfield, Michael J.
dc.contributor.author Xiong, Chuan
dc.contributor.author Yue, Qun
dc.contributor.author Zhang, Xiaoling
dc.date.accessioned 2019-10-15T07:38:49Z
dc.date.available 2019-10-15T07:38:49Z
dc.date.issued 2018-06-11
dc.description.abstract Draft genomes of the species Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina and Morchella septimelata are presented. Both mating types (MAT1-1 and MAT1-2) of Cercospora beticola are included. Two strains of Coleophoma cylindrospora that produce sulfated homotyrosine echinocandin variants, FR209602, FR220897 and FR220899 are presented. The sequencing of Aspergillus mulundensis, Coleophoma cylindrospora and Phialophora cf. hyalina has enabled mapping of the gene clusters encoding the chemical diversity from the echinocandin pathways, providing data that reveals the complexity of secondary metabolism in these different species. Overall these genomes provide a valuable resource for understanding the molecular processes underlying pathogenicity (in some cases), biology and toxin production of these economically important fungi. en_ZA
dc.description.department Biochemistry en_ZA
dc.description.department Forestry and Agricultural Biotechnology Institute (FABI) en_ZA
dc.description.department Genetics en_ZA
dc.description.department Microbiology and Plant Pathology en_ZA
dc.description.department Zoology and Entomology en_ZA
dc.description.librarian am2019 en_ZA
dc.description.sponsorship The authors of the research on the Berkeleyomyces basicola, Ceratocystis smalleyi, and Fusarium fracticaudum genomes thank the University of Pretoria, the Tree Protection Co-operative Programme (TPCP), the DST-NRF Centre of Excellence in Tree Health Biotechnology, the National Research Foundation, the Genomics Research Institute (GRI) and the DST-NRF SARCHI chair on Fungal Genomics for their financial support. The research on Cercospora beticola was supported by the United States Department of Agriculture, National Institute of Food and Agriculture Hatch project NYG-625424, and the Director’s Controlled Endowment Fund of The New York Agricultural Experiment Station, Cornell University, Geneva, New York, USA. The research on the genomes of Coleophoma cylindrospora, Phialophora cf. hyalina, and Aspergillus mulundensis was supported by the National Natural Science Foundation of China (NSFC) grants 31629001 to Z.A., 31741004 to Q.Y., Welch Foundation Grant AU- 0042-20030616 to ZA, and the Kay and Ben Fortson Endowment to GFB. en_ZA
dc.description.uri http://www.imafungus.org en_ZA
dc.identifier.citation Wingfield, B.D., Bills, G.F., Dong, Y. et al. 2018, 'Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata', IMA Fungus, vol. 9, no, 1, pp. 199-223. en_ZA
dc.identifier.issn 2210-6340 (print)
dc.identifier.issn 2210-6359 (online)
dc.identifier.issn 10.5598/imafungus.2018.09.01.13
dc.identifier.uri http://hdl.handle.net/2263/71822
dc.language.iso en en_ZA
dc.publisher International Mycological Association en_ZA
dc.rights © 2019 International Mycological Association en_ZA
dc.subject Beta vulgaris en_ZA
dc.subject Carya cordiformis en_ZA
dc.subject Echinocandin gene clusters en_ZA
dc.subject Mulundocandins en_ZA
dc.subject Pitch canker en_ZA
dc.subject Peumocandins en_ZA
dc.title Draft genome sequence of Annulohypoxylon stygium, Aspergillus mulundensis, Berkeleyomyces basicola (syn. Thielaviopsis basicola), Ceratocystis smalleyi, two Cercospora beticola strains, Coleophoma cylindrospora, Fusarium fracticaudum, Phialophora cf. hyalina, and Morchella septimelata en_ZA
dc.type Article en_ZA


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