Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa
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| dc.contributor.author | Mbelle, Nontombi Marylucy
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| dc.contributor.author | Maningi, Nontuthuko Excellent
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| dc.contributor.author | Tshisevhe, Vhudzani
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| dc.contributor.author | Modipane, Lesedi
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| dc.contributor.author | Amoako, Daniel Gyamfi
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| dc.contributor.author | Osei Sekyere, John
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| dc.date.accessioned | 2018-10-18T04:59:59Z | |
| dc.date.available | 2018-10-18T04:59:59Z | |
| dc.date.issued | 2017-11-30 | |
| dc.description.abstract | We report the first draft genome sequence of an Enterococcus faecium sequence type 18 (ST18) strain isolated from a tuberculosis patient in Africa. The genome is comprised of 3,202,539 bp, 501 contigs, 37.70% GC content, 3,202 proteinencoding genes, and 61 RNA genes. The resistome and virulome of this important pathogen are presented herein. | en_ZA |
| dc.description.department | Medical Microbiology | en_ZA |
| dc.description.librarian | am2018 | en_ZA |
| dc.description.sponsorship | Grant 94445 of the National Health Laboratory Services of South Africa. | en_ZA |
| dc.description.uri | http://genomea.asm.org | en_ZA |
| dc.identifier.citation | Mbelle NM, Maningi NE, Tshisevhe V, Modipane L, Amoako DG, Osei Sekyere J. 2017. Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa. Genome Announc 5:e01381-17. https://DOI.org/10.1128/genomeA.01381-17. | en_ZA |
| dc.identifier.issn | 2169-8287 (online) | |
| dc.identifier.other | 10.1128/genomeA.01381-17 | |
| dc.identifier.uri | http://hdl.handle.net/2263/66931 | |
| dc.language.iso | en | en_ZA |
| dc.publisher | American Society for Microbiology | en_ZA |
| dc.rights | © 2018 [Author et al]. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license. | en_ZA |
| dc.subject | Whole genome sequencing (WGS) | en_ZA |
| dc.subject | Urinary tract infection (UTI) | en_ZA |
| dc.subject | Tuberculosis (TB) | en_ZA |
| dc.subject | South Africa (SA) | en_ZA |
| dc.subject | RNA gene | en_ZA |
| dc.subject | Multidrug-resistant (MDR) | en_ZA |
| dc.subject | Microbial genome | en_ZA |
| dc.subject | Hydrolysis | en_ZA |
| dc.subject | gyrA gene | en_ZA |
| dc.subject | Genetic resistance | en_ZA |
| dc.subject | Genetic code | en_ZA |
| dc.subject | Gene mutation | en_ZA |
| dc.subject | Gene identification | en_ZA |
| dc.subject | Enterococcus faecium | en_ZA |
| dc.subject | Drug screening | en_ZA |
| dc.subject | Cell adhesion | en_ZA |
| dc.subject | Bacterium isolate | en_ZA |
| dc.subject | Bacterial virulence | en_ZA |
| dc.subject | Bacterial strain | en_ZA |
| dc.subject | Bacterial genome | en_ZA |
| dc.subject | Bacterial cell wall | en_ZA |
| dc.subject | Antibiotic sensitivity | en_ZA |
| dc.subject | Anaerobic growth | en_ZA |
| dc.subject | Untranslated RNA | en_ZA |
| dc.subject | Transfer RNA | en_ZA |
| dc.subject | Tetracycline | en_ZA |
| dc.subject | Streptomycin | en_ZA |
| dc.subject | Ribosome RNA | en_ZA |
| dc.subject | Quinolone derivative | en_ZA |
| dc.subject | Protein ParC | en_ZA |
| dc.subject | Moxifloxacin | en_ZA |
| dc.subject | Gentamicin | en_ZA |
| dc.subject | Genomic DNA | en_ZA |
| dc.subject | Collagen binding protein | en_ZA |
| dc.subject | Clindamycin | en_ZA |
| dc.subject | Ciprofloxacin | en_ZA |
| dc.subject | Agarose | en_ZA |
| dc.title | Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa | en_ZA |
| dc.type | Article | en_ZA |
