Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa

Show simple item record

dc.contributor.author Mbelle, Nontombi Marylucy
dc.contributor.author Maningi, Nontuthuko Excellent
dc.contributor.author Tshisevhe, Vhudzani
dc.contributor.author Modipane, Lesedi
dc.contributor.author Amoako, Daniel Gyamfi
dc.contributor.author Osei Sekyere, John
dc.date.accessioned 2018-10-18T04:59:59Z
dc.date.available 2018-10-18T04:59:59Z
dc.date.issued 2017-11-30
dc.description.abstract We report the first draft genome sequence of an Enterococcus faecium sequence type 18 (ST18) strain isolated from a tuberculosis patient in Africa. The genome is comprised of 3,202,539 bp, 501 contigs, 37.70% GC content, 3,202 proteinencoding genes, and 61 RNA genes. The resistome and virulome of this important pathogen are presented herein. en_ZA
dc.description.department Medical Microbiology en_ZA
dc.description.librarian am2018 en_ZA
dc.description.sponsorship Grant 94445 of the National Health Laboratory Services of South Africa. en_ZA
dc.description.uri http://genomea.asm.org en_ZA
dc.identifier.citation Mbelle NM, Maningi NE, Tshisevhe V, Modipane L, Amoako DG, Osei Sekyere J. 2017. Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa. Genome Announc 5:e01381-17. https://DOI.org/10.1128/genomeA.01381-17. en_ZA
dc.identifier.issn 2169-8287 (online)
dc.identifier.other 10.1128/genomeA.01381-17
dc.identifier.uri http://hdl.handle.net/2263/66931
dc.language.iso en en_ZA
dc.publisher American Society for Microbiology en_ZA
dc.rights © 2018 [Author et al]. This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International license. en_ZA
dc.subject Whole genome sequencing (WGS) en_ZA
dc.subject Urinary tract infection (UTI) en_ZA
dc.subject Tuberculosis (TB) en_ZA
dc.subject South Africa (SA) en_ZA
dc.subject RNA gene en_ZA
dc.subject Multidrug-resistant (MDR) en_ZA
dc.subject Microbial genome en_ZA
dc.subject Hydrolysis en_ZA
dc.subject gyrA gene en_ZA
dc.subject Genetic resistance en_ZA
dc.subject Genetic code en_ZA
dc.subject Gene mutation en_ZA
dc.subject Gene identification en_ZA
dc.subject Enterococcus faecium en_ZA
dc.subject Drug screening en_ZA
dc.subject Cell adhesion en_ZA
dc.subject Bacterium isolate en_ZA
dc.subject Bacterial virulence en_ZA
dc.subject Bacterial strain en_ZA
dc.subject Bacterial genome en_ZA
dc.subject Bacterial cell wall en_ZA
dc.subject Antibiotic sensitivity en_ZA
dc.subject Anaerobic growth en_ZA
dc.subject Untranslated RNA en_ZA
dc.subject Transfer RNA en_ZA
dc.subject Tetracycline en_ZA
dc.subject Streptomycin en_ZA
dc.subject Ribosome RNA en_ZA
dc.subject Quinolone derivative en_ZA
dc.subject Protein ParC en_ZA
dc.subject Moxifloxacin en_ZA
dc.subject Gentamicin en_ZA
dc.subject Genomic DNA en_ZA
dc.subject Collagen binding protein en_ZA
dc.subject Clindamycin en_ZA
dc.subject Ciprofloxacin en_ZA
dc.subject Agarose en_ZA
dc.title Draft genome sequence of a clinical Enterococcus faecium sequence type 18 strain from South Africa en_ZA
dc.type Article en_ZA


Files in this item

Icon
Name: Mbelle_Draft_2017.pdf
Size: 144.2Kb
Format: PDF
Description: Article
View/Open

This item appears in the following Collection(s)

Show simple item record